Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CNTNAP4Q9C0A0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CNTNAP4Q9C0A0 MTND5P19-201ENST00000424872 1794 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC000374.1-201ENST00000434698 1745 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 PROS2P-201ENST00000474651 1951 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC007529.1-201ENST00000418574 2178 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 Y_RNA.135-201ENST00000363439 95 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 Y_RNA.378-201ENST00000365652 113 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 MIR483-201ENST00000385070 76 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC016696.1-201ENST00000446949 318 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL451050.1-201ENST00000450126 415 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 RN7SL809P-201ENST00000482040 297 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 RPS27P27-201ENST00000498779 255 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 MRPS35P2-201ENST00000508242 191 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-513P-201ENST00000516104 104 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-256P-201ENST00000516747 97 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 RNU7-143P-201ENST00000516781 65 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 RNA5SP179-201ENST00000517284 121 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 MYL12AP1-201ENST00000518490 515 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC007991.1-201ENST00000522680 631 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC018442.3-201ENST00000523025 183 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 IGKV2D-19-201ENST00000523346 262 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL118558.2-201ENST00000556294 238 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL670379.11-201ENST00000604059 253 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL670379.10-201ENST00000604330 253 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL670379.12-201ENST00000605291 253 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL670379.9-201ENST00000605428 253 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AL008729.2-201ENST00000606393 473 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC022893.3-201ENST00000607665 437 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC005086.4-201ENST00000623065 213 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC011155.2-201ENST00000623202 216 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 AC055839.1-201ENST00000634467 498 ntBASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP4Q9C0A0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-1032P-201ENST00000384100 107 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 MIR92A2-201ENST00000385299 75 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 PTMAP5-201ENST00000393073 333 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 MIR548I3-201ENST00000408378 149 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 MIR548I1-201ENST00000408810 149 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 RPS12P24-201ENST00000412619 387 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 MTATP6P29-201ENST00000415057 132 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC018865.2-201ENST00000423631 129 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AL136126.1-201ENST00000473603 402 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 SNORA25.10-201ENST00000515926 124 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 snoU109.6-201ENST00000516831 118 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AP000763.2-201ENST00000540641 163 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AL358913.1-201ENST00000554342 121 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC023043.2-201ENST00000589678 1026 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC091167.4-201ENST00000605079 184 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC140113.4-201ENST00000622087 222 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 AC244517.1-201ENST00000606030 2086 ntBASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP4Q9C0A0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms