Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TMEM167AP1-201ENST00000423409 219 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 HMGB1P18-201ENST00000438801 619 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AL049829.1-201ENST00000465411 156 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC104164.3-201ENST00000467363 1258 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC104472.2-201ENST00000469035 601 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 RPL30P14-201ENST00000482744 348 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 LINC00888-204ENST00000487386 421 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 SEM1P1-201ENST00000506694 209 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC112673.1-201ENST00000513168 575 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 RNU6-583P-201ENST00000516012 92 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 RNA5SP281-201ENST00000516504 135 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC091163.3-201ENST00000518269 1144 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AL132657.2-201ENST00000564417 358 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 VN1R83P-201ENST00000595685 445 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC106791.2-201ENST00000604680 391 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AL138478.1-201ENST00000612252 832 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC011890.2-201ENST00000613393 294 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC011460.1-201ENST00000636268 1834 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AL356473.1-201ENST00000406203 1408 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 RPL21P132-201ENST00000331267 462 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 DEFB108F-201ENST00000344638 222 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 SNORD114-30-201ENST00000364448 72 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 RNU6-1122P-201ENST00000384449 107 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AL079342.1-201ENST00000401460 267 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 MTCO2P5-201ENST00000422621 426 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 RPL27AP8-201ENST00000424277 446 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 HMGN2P3-201ENST00000433603 273 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 HMGN2P5-201ENST00000436882 273 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 RPL18AP17-201ENST00000455326 198 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC113420.1-201ENST00000507903 571 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 DEFB108D-201ENST00000527787 222 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC005832.3-201ENST00000537929 631 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 YWHAZP1-201ENST00000556286 722 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC025754.2-201ENST00000606491 432 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC011330.2-201ENST00000621680 635 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 MTND5P6-201ENST00000422338 1798 ntBASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
RPAP1Q9BWH6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 RNA5SP393-201ENST00000363423 117 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 HMGB1P17-201ENST00000403495 628 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AL355143.1-201ENST00000407101 841 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 SUMO1P4-201ENST00000429430 302 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 RPL23AP58-201ENST00000440453 469 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 RPL31P60-201ENST00000478450 367 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AC107222.1-201ENST00000510899 637 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AL138880.2-201ENST00000616214 239 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AL596245.1-201ENST00000618994 362 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AL049777.1-201ENST00000622740 518 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AP000676.4-201ENST00000624659 623 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 AC004808.1-201ENST00000627671 721 ntBASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RPAP1Q9BWH6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 SNORD116-12-201ENST00000384468 92 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 FO393413.1-201ENST00000402892 195 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL591416.1-201ENST00000404015 867 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 MTND4P6-201ENST00000438297 472 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 SDCBPP1-201ENST00000440192 890 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL592447.1-201ENST00000447592 540 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC096571.1-202ENST00000506634 735 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 XKRY-201ENST00000510392 1100 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL359273.1-201ENST00000510918 627 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms