Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA3Q99758 AC007229.1-201ENST00000590455 412 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 PCNAP1-202ENST00000595299 752 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AC097504.2-201ENST00000608088 454 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ABCA3Q99758 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA3Q99758 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA3Q99758 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA3Q99758 RNU6-335P-201ENST00000364563 113 ntBASIC1.82□□□□□ -2.12
ABCA3Q99758 AL357078.2-201ENST00000416486 427 ntBASIC1.82□□□□□ -2.12
ABCA3Q99758 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA3Q99758 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.82□□□□□ -2.12
ABCA3Q99758 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.82□□□□□ -2.12
ABCA3Q99758 Z85994.2-201ENST00000434327 452 ntBASIC1.82□□□□□ -2.12
ABCA3Q99758 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA3Q99758 AC096992.1-201ENST00000459808 709 ntBASIC1.82□□□□□ -2.12
ABCA3Q99758 AP003717.3-201ENST00000544832 1180 ntBASIC1.82□□□□□ -2.12
ABCA3Q99758 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA3Q99758 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.82□□□□□ -2.12
ABCA3Q99758 AC112503.2-201ENST00000609005 552 ntBASIC1.82□□□□□ -2.12
ABCA3Q99758 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
ABCA3Q99758 Y_RNA.30-201ENST00000362572 97 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.81□□□□□ -2.12
ABCA3Q99758 IPO7P1-201ENST00000442031 636 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 RPL31P20-201ENST00000449593 360 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ABCA3Q99758 AL359273.1-201ENST00000510918 627 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 OR5BM1P-201ENST00000512021 366 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 AC008837.2-201ENST00000513076 418 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 AC019176.1-201ENST00000518519 225 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 OR10V3P-201ENST00000525712 725 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 FAM106DP-201ENST00000586416 501 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 AC012640.5-201ENST00000623897 319 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 AC079597.1-201ENST00000624306 508 ntBASIC1.81□□□□□ -2.12
ABCA3Q99758 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ABCA3Q99758 RNU4-72P-201ENST00000410754 173 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.8□□□□□ -2.12
ABCA3Q99758 RPL35AP22-201ENST00000436855 335 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AC090096.1-201ENST00000489168 390 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AC022493.1-201ENST00000492984 337 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.8□□□□□ -2.12
ABCA3Q99758 Y_RNA.675-201ENST00000516389 149 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.8□□□□□ -2.12
ABCA3Q99758 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.8□□□□□ -2.12
ABCA3Q99758 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.8□□□□□ -2.12
ABCA3Q99758 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCA3Q99758 AC097468.3-201ENST00000607956 456 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AC006329.2-201ENST00000611491 394 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCA3Q99758 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.8□□□□□ -2.12
ABCA3Q99758 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ABCA3Q99758 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ABCA3Q99758 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.8□□□□□ -2.12
ABCA3Q99758 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.8□□□□□ -2.12
ABCA3Q99758 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.8□□□□□ -2.12
ABCA3Q99758 RPL23AP41-201ENST00000484754 458 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.8□□□□□ -2.12
ABCA3Q99758 AC068135.2-201ENST00000569293 1028 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AC106028.5-201ENST00000610332 395 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 AC110079.1-202ENST00000635213 138 ntBASIC1.8□□□□□ -2.12
ABCA3Q99758 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ABCA3Q99758 RNU6-697P-201ENST00000363348 107 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 SNORD114-27-201ENST00000363766 70 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ABCA3Q99758 MIR320A-201ENST00000385302 82 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 RNA5SP38-201ENST00000410750 119 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ABCA3Q99758 AL606495.1-201ENST00000422100 813 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCA3Q99758 KLRA1P-201ENST00000503499 986 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 SUMO2P6-201ENST00000505273 288 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 MTND3P24-201ENST00000506306 329 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ABCA3Q99758 AC105914.1-201ENST00000511798 226 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 AL138976.2-201ENST00000563989 694 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCA3Q99758 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.79□□□□□ -2.12
ABCA3Q99758 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA3Q99758 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.79□□□□□ -2.12
ABCA3Q99758 AC106791.2-201ENST00000604680 391 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 AL590282.1-201ENST00000610379 1136 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
ABCA3Q99758 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ABCA3Q99758 AC004022.2-201ENST00000413824 193 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA3Q99758 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 AL512661.1-201ENST00000434586 1253 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 OR10R1P-201ENST00000441524 1141 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ABCA3Q99758 HMGB1P26-201ENST00000452520 628 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 RPS24P6-201ENST00000452670 400 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.78□□□□□ -2.12
ABCA3Q99758 AP002345.1-201ENST00000456493 928 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 MTCO2P9-201ENST00000503214 694 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 AC004062.1-201ENST00000509926 645 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 RNU1-104P-201ENST00000517280 175 ntBASIC1.78□□□□□ -2.12
ABCA3Q99758 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ABCA3Q99758 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms