Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CDX2Q99626 Y_RNA.540-201ENST00000384638 111 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 RPS15AP38-201ENST00000413110 372 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 PTP4A1P7-201ENST00000423476 514 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX2Q99626 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX2Q99626 TRGVB-201ENST00000453257 471 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 Z82190.1-201ENST00000454534 490 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC009901.1-201ENST00000506703 541 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC026412.2-201ENST00000512270 1075 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 SNRPGP16-201ENST00000533275 226 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AK6P1-201ENST00000540219 478 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.39□□□□□ -2.03
CDX2Q99626 SETP7-201ENST00000552169 453 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX2Q99626 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX2Q99626 AC138915.2-201ENST00000569776 97 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX2Q99626 BNIP3P24-201ENST00000593398 557 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AL133507.1-201ENST00000605269 557 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC069545.1-201ENST00000605671 358 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AL359198.2-201ENST00000611836 194 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CDX2Q99626 AC120349.2-201ENST00000625002 298 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 AC106858.1-201ENST00000637497 429 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 U6.101-201ENST00000637707 76 ntBASIC2.39□□□□□ -2.03
CDX2Q99626 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CDX2Q99626 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX2Q99626 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.38□□□□□ -2.03
CDX2Q99626 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CDX2Q99626 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDX2Q99626 SNRPEP3-201ENST00000338402 276 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDX2Q99626 RNU6-1074P-201ENST00000383995 104 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDX2Q99626 RPL21P1-201ENST00000399532 476 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDX2Q99626 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.38□□□□□ -2.03
CDX2Q99626 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX2Q99626 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX2Q99626 VN1R10P-201ENST00000447106 875 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX2Q99626 AL163540.1-201ENST00000485382 386 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 SEM1P1-201ENST00000506694 209 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.38□□□□□ -2.03
CDX2Q99626 AC093752.1-206ENST00000511823 336 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX2Q99626 OR4P1P-201ENST00000530808 1136 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDX2Q99626 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX2Q99626 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX2Q99626 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDX2Q99626 AC025281.1-201ENST00000567026 265 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AC104072.1-201ENST00000568817 668 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 MIR5708-201ENST00000579723 85 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 SNORA4-201ENST00000584302 138 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AL606834.3-201ENST00000602615 496 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AC011458.1-201ENST00000604034 617 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AL445435.1-201ENST00000604232 665 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AC019159.1-201ENST00000605094 187 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 AL356585.4-201ENST00000623078 1229 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CDX2Q99626 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDX2Q99626 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDX2Q99626 Z82195.2-201ENST00000612348 18351 ntBASIC2.38□□□□□ -2.03
CDX2Q99626 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDX2Q99626 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDX2Q99626 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDX2Q99626 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 RN7SKP226-201ENST00000364912 300 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC069282.1-201ENST00000411911 526 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AL592310.1-201ENST00000414330 671 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 BX682237.1-201ENST00000415016 335 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 MTCO2P17-201ENST00000424336 677 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 PSMA6P3-201ENST00000428242 164 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 SEPT7P5-201ENST00000434048 306 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC018634.1-201ENST00000437554 401 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 MTCYBP11-201ENST00000447254 1109 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 RPS15AP17-201ENST00000470598 390 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC010460.2-201ENST00000509054 677 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC087373.1-201ENST00000524920 491 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.37□□□□□ -2.03
CDX2Q99626 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 NBEAP1-201ENST00000554452 979 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX2Q99626 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.37□□□□□ -2.03
CDX2Q99626 MIR5092-201ENST00000583139 88 ntBASIC2.37□□□□□ -2.03
CDX2Q99626 AC061975.8-201ENST00000587058 721 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms