Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIN3AQ96ST3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AL365361.1-201ENST00000566942 3481 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AL161781.1-201ENST00000354277 403 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 MIR34A-201ENST00000385130 110 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 MIR9-1-201ENST00000385198 89 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC092447.6-201ENST00000414578 210 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC004924.1-201ENST00000480160 781 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC022447.1-201ENST00000515358 464 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC025881.1-201ENST00000518851 512 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 OR4P1P-201ENST00000530808 1136 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 OR6C73P-201ENST00000546432 358 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC090615.1-201ENST00000577519 154 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC006504.3-201ENST00000586818 523 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC011939.3-201ENST00000613686 466 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC027807.2-201ENST00000616099 408 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC025048.6-202ENST00000627667 438 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 MIR6733-201ENST00000635723 61 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 AC090582.1-201ENST00000636321 199 ntBASIC3.84□□□□□ -1.79
SIN3AQ96ST3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.84□□□□□ -1.8
SIN3AQ96ST3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SIN3AQ96ST3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 RNA5SP258-201ENST00000362750 119 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 RNU6-7-201ENST00000364784 107 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 RNU6-8-201ENST00000365467 107 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 Y_RNA.553-201ENST00000384670 102 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 RPL17P12-201ENST00000413391 526 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 MTND1P28-201ENST00000435623 950 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AL353706.1-201ENST00000436728 494 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 MTCO1P19-201ENST00000443487 500 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC133134.1-201ENST00000466800 359 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 SNORA31.21-201ENST00000517180 77 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC100870.1-201ENST00000522035 505 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC024909.2-201ENST00000553035 286 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC068276.1-201ENST00000605793 379 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC009878.1-201ENST00000621819 340 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC093591.3-201ENST00000634516 308 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 AC092447.10-201ENST00000620607 1652 ntBASIC3.83□□□□□ -1.8
SIN3AQ96ST3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIN3AQ96ST3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 CCT4P2-201ENST00000233836 1548 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC092104.1-201ENST00000497346 1441 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RNU5F-7P-201ENST00000363696 115 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RNU6-1207P-201ENST00000384343 107 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RNY3P10-201ENST00000384764 102 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RNA5SP210-201ENST00000391034 120 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 USP9YP20-201ENST00000419224 558 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 NUP35P1-201ENST00000422734 947 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RPL7P36-201ENST00000444633 681 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 ST13P20-201ENST00000447996 1065 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RNA5SP269-201ENST00000459032 137 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC091435.1-201ENST00000505442 584 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 MTND4P2-201ENST00000507767 1203 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 SETP7-201ENST00000552169 453 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 MIR5697-201ENST00000578045 78 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC008277.2-201ENST00000605196 797 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC128687.1-201ENST00000605304 619 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC091965.4-201ENST00000607691 587 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 AC018755.4-201ENST00000619715 454 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 U6.98-201ENST00000637157 84 ntBASIC3.82□□□□□ -1.8
SIN3AQ96ST3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIN3AQ96ST3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIN3AQ96ST3 FGF7P2-201ENST00000332473 296 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms