Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.1□□□□□ -2.07
IFT140Q96RY7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.09□□□□□ -2.07
IFT140Q96RY7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
IFT140Q96RY7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 RFC5P1-201ENST00000454419 874 ntBASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC008427.1-201ENST00000503102 655 ntBASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC068831.7-201ENST00000616954 363 ntBASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.09□□□□□ -2.07
IFT140Q96RY7 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
IFT140Q96RY7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
IFT140Q96RY7 CENPCP1-201ENST00000533085 2578 ntBASIC2.09□□□□□ -2.08
IFT140Q96RY7 AL354685.2-201ENST00000448218 1447 ntBASIC2.09□□□□□ -2.08
IFT140Q96RY7 RNU6-697P-201ENST00000363348 107 ntBASIC2.08□□□□□ -2.08
IFT140Q96RY7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.08□□□□□ -2.08
IFT140Q96RY7 MTND4P11-201ENST00000417020 1058 ntBASIC2.08□□□□□ -2.08
IFT140Q96RY7 OR10R1P-201ENST00000441524 1141 ntBASIC2.08□□□□□ -2.08
IFT140Q96RY7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
IFT140Q96RY7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.08□□□□□ -2.08
IFT140Q96RY7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.08□□□□□ -2.08
IFT140Q96RY7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.08□□□□□ -2.08
IFT140Q96RY7 AL138976.2-201ENST00000563989 694 ntBASIC2.08□□□□□ -2.08
IFT140Q96RY7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.08□□□□□ -2.08
IFT140Q96RY7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
IFT140Q96RY7 RNU6-799P-201ENST00000363567 107 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 RNU1-133P-201ENST00000364867 167 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC234775.1-201ENST00000454247 670 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 RNU7-27P-201ENST00000459281 62 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 RN7SKP265-201ENST00000516448 223 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 AP004607.1-201ENST00000524456 203 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC069304.3-201ENST00000603938 1084 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
IFT140Q96RY7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
IFT140Q96RY7 RPL23AP33-201ENST00000442301 452 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC006499.2-201ENST00000513470 337 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 RN7SL793P-201ENST00000583259 296 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.07□□□□□ -2.08
IFT140Q96RY7 SNRPGP15-201ENST00000600149 222 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 MIR98-201ENST00000606724 119 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 AL031601.2-202ENST00000622650 282 ntBASIC2.07□□□□□ -2.08
IFT140Q96RY7 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
IFT140Q96RY7 SNORA14A-201ENST00000364773 135 ntBASIC2.06□□□□□ -2.08
IFT140Q96RY7 AC007098.1-201ENST00000420122 367 ntBASIC2.06□□□□□ -2.08
IFT140Q96RY7 AC244098.2-201ENST00000422068 99 ntBASIC2.06□□□□□ -2.08
IFT140Q96RY7 HMGN2P30-201ENST00000423237 256 ntBASIC2.06□□□□□ -2.08
IFT140Q96RY7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.06□□□□□ -2.08
IFT140Q96RY7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
IFT140Q96RY7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.06□□□□□ -2.08
IFT140Q96RY7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
IFT140Q96RY7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
IFT140Q96RY7 RNU6-461P-201ENST00000364195 107 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 RNU6-532P-201ENST00000384318 107 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 MIR627-201ENST00000384979 97 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 MIR625-201ENST00000385047 85 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 AL355497.1-201ENST00000406262 551 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.05□□□□□ -2.08
IFT140Q96RY7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.05□□□□□ -2.08
IFT140Q96RY7 RNU6-113P-201ENST00000516653 101 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 GLYCAM1-201ENST00000546596 285 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.05□□□□□ -2.08
IFT140Q96RY7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.05□□□□□ -2.08
IFT140Q96RY7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.05□□□□□ -2.08
IFT140Q96RY7 AC025048.6-202ENST00000627667 438 ntBASIC2.05□□□□□ -2.08
IFT140Q96RY7 ICE2P2-201ENST00000483823 2787 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 RNU1-52P-201ENST00000384190 164 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 AL138880.1-201ENST00000405824 642 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
IFT140Q96RY7 RPL21P66-201ENST00000426566 466 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.04□□□□□ -2.08
IFT140Q96RY7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.04□□□□□ -2.08
IFT140Q96RY7 AL121821.2-201ENST00000556081 394 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 AC068338.1-201ENST00000565567 176 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 AC090616.5-202ENST00000582111 297 ntBASIC2.04□□□□□ -2.08
IFT140Q96RY7 AC073055.1-201ENST00000456901 1621 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 MIR373-201ENST00000362273 69 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 RNA5SP38-201ENST00000410750 119 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 RNU2-32P-201ENST00000411193 191 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.03□□□□□ -2.08
IFT140Q96RY7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.03□□□□□ -2.08
IFT140Q96RY7 SNORD121B-201ENST00000458838 81 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.03□□□□□ -2.08
IFT140Q96RY7 MTCYBP41-201ENST00000528913 1123 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms