Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP47Q96K76 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
USP47Q96K76 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.77□□□□□ -1.97
USP47Q96K76 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.77□□□□□ -1.97
USP47Q96K76 AC009961.3-201ENST00000449832 765 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AL359385.1-201ENST00000456509 365 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AL031183.1-201ENST00000457667 207 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.77□□□□□ -1.97
USP47Q96K76 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.77□□□□□ -1.97
USP47Q96K76 SNORA70.16-201ENST00000516390 95 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USP47Q96K76 AP001189.2-201ENST00000527320 189 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 FAM92A1P1-201ENST00000528023 890 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.77□□□□□ -1.97
USP47Q96K76 CR383656.7-201ENST00000548164 174 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 SETP7-201ENST00000552169 453 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.77□□□□□ -1.97
USP47Q96K76 AC138915.2-201ENST00000569776 97 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.77□□□□□ -1.97
USP47Q96K76 DUXAP3-201ENST00000603616 594 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AL035411.2-201ENST00000604022 421 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 AL031176.1-201ENST00000604554 466 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USP47Q96K76 AC103988.1-201ENST00000566382 2177 ntBASIC2.77□□□□□ -1.97
USP47Q96K76 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
USP47Q96K76 SNRPEP2-201ENST00000397592 279 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 Y_RNA.595-201ENST00000410403 105 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.76□□□□□ -1.97
USP47Q96K76 LUZP4P1-201ENST00000415420 344 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 USP9YP27-201ENST00000418455 438 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 CYCSP49-201ENST00000420810 319 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AL592045.1-201ENST00000429867 352 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AC009237.8-201ENST00000445492 379 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AL590664.1-201ENST00000448065 339 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 MTAPP1-201ENST00000489154 819 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AC026414.1-201ENST00000504046 698 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.76□□□□□ -1.97
USP47Q96K76 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
USP47Q96K76 AP003066.2-201ENST00000529375 555 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AC087894.1-201ENST00000538359 518 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.76□□□□□ -1.97
USP47Q96K76 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
USP47Q96K76 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.76□□□□□ -1.97
USP47Q96K76 OR4K7P-201ENST00000580232 945 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 BNIP3P24-201ENST00000593398 557 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 AC018926.1-201ENST00000616335 435 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 ADAM3A-203ENST00000461344 2157 ntBASIC2.76□□□□□ -1.97
USP47Q96K76 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
USP47Q96K76 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
USP47Q96K76 OR4G11P-202ENST00000642116 1414 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 RN7SKP226-201ENST00000364912 300 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 SNORA1.3-201ENST00000384676 136 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.75□□□□□ -1.97
USP47Q96K76 RPL23AP36-201ENST00000413895 458 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 TMEM167AP1-201ENST00000423409 219 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 DPRXP1-201ENST00000426312 460 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.75□□□□□ -1.97
USP47Q96K76 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.75□□□□□ -1.97
USP47Q96K76 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.75□□□□□ -1.97
USP47Q96K76 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.75□□□□□ -1.97
USP47Q96K76 RN7SKP210-201ENST00000459176 261 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 FAM172BP-201ENST00000487497 1089 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.75□□□□□ -1.97
USP47Q96K76 RNU6-1261P-201ENST00000517194 104 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 OR10V3P-201ENST00000525712 725 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.75□□□□□ -1.97
USP47Q96K76 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
USP47Q96K76 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.75□□□□□ -1.97
USP47Q96K76 DNAJC8P1-201ENST00000554535 372 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 OR4K8P-201ENST00000578842 1048 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AC099785.1-201ENST00000605697 437 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AP002826.1-201ENST00000608835 315 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AL391813.2-201ENST00000609113 322 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AC091046.2-201ENST00000620775 665 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 AP000553.5-201ENST00000641933 54 ntBASIC2.75□□□□□ -1.97
USP47Q96K76 RNU6-236P-201ENST00000363886 106 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 RNU6-707P-201ENST00000364647 95 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 RNA5SP37-201ENST00000365420 130 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 MIR135A2-201ENST00000384854 100 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 SNORD65.1-201ENST00000390889 71 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 RNU6-882P-201ENST00000391025 103 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 RNA5SP252-201ENST00000391131 119 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC019070.1-201ENST00000415008 1024 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC005297.2-201ENST00000450430 606 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 FAM92A1P2-202ENST00000504766 877 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC108729.3-201ENST00000513484 108 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 ISCA1P3-201ENST00000577104 373 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 MIR4498-201ENST00000577599 66 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 MIR5708-201ENST00000579723 85 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC245036.5-201ENST00000596330 847 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 RPL23AP78-201ENST00000599928 470 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms