Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC120057.2-201ENST00000571520 271 ntBASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AL022345.1-201ENST00000607292 135 ntBASIC4.24□□□□□ -1.73
CHFRQ96EP1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AL157817.1-201ENST00000614264 790 ntBASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC018926.3-201ENST00000618841 406 ntBASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 AC116667.1-201ENST00000604855 2072 ntBASIC4.24□□□□□ -1.73
CHFRQ96EP1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 TAB3P1-202ENST00000452645 1634 ntBASIC4.24□□□□□ -1.73
CHFRQ96EP1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHFRQ96EP1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CHFRQ96EP1 ASNSP3-201ENST00000451989 1306 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC016588.2-201ENST00000632484 3021 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 Y_RNA.257-201ENST00000364596 102 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 RNU6-108P-201ENST00000365558 107 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC117470.1-201ENST00000381974 330 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 RNU6-657P-201ENST00000383904 107 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 SNORA20.2-201ENST00000383922 131 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 MIR514A2-201ENST00000385131 88 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 MIR514A3-201ENST00000385132 88 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 HSPE1P12-201ENST00000412576 301 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 MTATP6P29-201ENST00000415057 132 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC008267.5-201ENST00000424928 265 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 RPL37P1-201ENST00000432310 284 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 GOT2P5-201ENST00000433995 546 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 SNRPEP7-201ENST00000438350 220 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 RNU7-136P-201ENST00000458819 69 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 RPL9P32-201ENST00000464118 620 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 FAM206BP-201ENST00000510179 541 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 RNU6-764P-201ENST00000516396 105 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 RN7SKP283-201ENST00000517197 270 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC090572.1-201ENST00000519251 160 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC090151.1-201ENST00000520784 730 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC022616.3-201ENST00000523940 148 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC100770.1-201ENST00000532310 322 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC123904.2-201ENST00000548059 300 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 MIR5685-201ENST00000579080 79 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 MIR3118-1-201ENST00000581787 76 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AC005357.1-201ENST00000588399 301 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AL391813.2-201ENST00000609113 322 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 BX664608.1-201ENST00000610519 487 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AL121772.2-201ENST00000614331 297 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 ZNF519P1-201ENST00000449011 1626 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.23□□□□□ -1.73
CHFRQ96EP1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.23□□□□□ -1.73
CHFRQ96EP1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHFRQ96EP1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHFRQ96EP1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.22□□□□□ -1.73
CHFRQ96EP1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHFRQ96EP1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.22□□□□□ -1.73
CHFRQ96EP1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.22□□□□□ -1.73
CHFRQ96EP1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHFRQ96EP1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHFRQ96EP1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.22□□□□□ -1.73
CHFRQ96EP1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHFRQ96EP1 RNU6-730P-201ENST00000383954 104 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 RNU6-213P-201ENST00000384051 104 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 RNU6-209P-201ENST00000384118 107 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 SNORD3H-201ENST00000384486 214 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 EIF5P1-201ENST00000400019 1231 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 RNU6ATAC-201ENST00000408749 126 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 RNU6-370P-201ENST00000411008 104 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 AL160275.2-201ENST00000412010 394 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.22□□□□□ -1.73
CHFRQ96EP1 CYP4F29P-201ENST00000420685 446 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 RPL31P12-201ENST00000422587 358 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 AC007283.2-201ENST00000424739 197 ntBASIC4.22□□□□□ -1.73
CHFRQ96EP1 AL353777.1-201ENST00000425552 326 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms