Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AP001804.3-201ENST00000525146 880 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC005332.10-201ENST00000612725 619 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 MIR96-201ENST00000362288 78 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC007560.1-201ENST00000426912 237 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 MTCYBP34-201ENST00000439552 670 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 BTF3P12-201ENST00000519620 469 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC073413.2-201ENST00000604332 360 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 BNIP3P4-201ENST00000604946 565 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC021755.4-201ENST00000616620 456 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC068880.5-201ENST00000624331 290 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.9□□□□□ -2.1
VPS8Q8N3P4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 MTND4P27-201ENST00000450813 1354 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 ZNF37BP-203ENST00000452306 1352 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 AC080100.1-201ENST00000624239 5356 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 RNU6-193P-201ENST00000410977 107 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 FO393414.1-201ENST00000428697 1184 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 CASP1P1-201ENST00000526345 212 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 MTCO1P40-201ENST00000574371 625 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS8Q8N3P4 MIR6767-201ENST00000637302 66 ntBASIC1.9□□□□□ -2.11
VPS8Q8N3P4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS8Q8N3P4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 RNU1-22P-201ENST00000363334 158 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 RNA5SP354-201ENST00000391247 136 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 AC016769.3-201ENST00000396562 315 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 SNORD23.1-201ENST00000408212 104 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 SNORA81-201ENST00000408493 178 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 UBE2FP3-201ENST00000436366 524 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 AL360221.1-201ENST00000445989 335 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS8Q8N3P4 SNRPGP9-201ENST00000456025 225 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 AC097493.1-201ENST00000463958 372 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 AC078857.1-201ENST00000469870 667 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.89□□□□□ -2.11
VPS8Q8N3P4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.89□□□□□ -2.11
VPS8Q8N3P4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS8Q8N3P4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VPS8Q8N3P4 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 RPL7P30-201ENST00000420888 709 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 ARL2BPP3-201ENST00000421226 480 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 AL365400.1-201ENST00000431854 640 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS8Q8N3P4 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 AGGF1P5-201ENST00000567900 919 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS8Q8N3P4 AC092474.3-201ENST00000603022 568 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 AL009028.1-201ENST00000604895 802 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 MIR6078-201ENST00000611069 100 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 HMGB1P24-202ENST00000615653 685 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 AL512643.1-201ENST00000635735 524 ntBASIC1.88□□□□□ -2.11
VPS8Q8N3P4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VPS8Q8N3P4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS8Q8N3P4 MTCYBP29-201ENST00000436327 1006 ntBASIC1.87□□□□□ -2.11
VPS8Q8N3P4 PIGFP3-201ENST00000441918 722 ntBASIC1.87□□□□□ -2.11
VPS8Q8N3P4 AC096992.1-201ENST00000459808 709 ntBASIC1.87□□□□□ -2.11
VPS8Q8N3P4 SNORA31.18-201ENST00000517043 134 ntBASIC1.87□□□□□ -2.11
VPS8Q8N3P4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS8Q8N3P4 OR1M4P-201ENST00000589199 287 ntBASIC1.87□□□□□ -2.11
VPS8Q8N3P4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.87□□□□□ -2.11
VPS8Q8N3P4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS8Q8N3P4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
VPS8Q8N3P4 AL390862.1-201ENST00000635467 1469 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 AC009812.4-201ENST00000569134 1805 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VPS8Q8N3P4 RNU6-707P-201ENST00000364647 95 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 RNU2-21P-201ENST00000410368 188 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 NAP1L1P3-201ENST00000462291 880 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS8Q8N3P4 AC080078.3-201ENST00000605407 463 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS8Q8N3P4 AL161629.2-201ENST00000615347 275 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS8Q8N3P4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS8Q8N3P4 AC005539.1-201ENST00000443768 1479 ntBASIC1.86□□□□□ -2.11
VPS8Q8N3P4 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 SNRPGP6-201ENST00000451124 220 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AC092902.1-201ENST00000486999 259 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms