Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC011477.1-204ENST00000623416 1325 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.65□□□□□ -1.98
CCDC50Q8IVM0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CCDC50Q8IVM0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC50Q8IVM0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 RNU6-359P-201ENST00000365466 108 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AL360182.1-201ENST00000397433 468 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 RPS4XP7-201ENST00000406274 780 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 MIR1290-201ENST00000408735 78 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 RNU2-52P-201ENST00000410680 190 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC099548.1-201ENST00000421443 426 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 NANOGP5-201ENST00000424456 877 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 SUMO1P4-201ENST00000429430 302 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AL512844.2-201ENST00000433990 593 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AL117351.1-201ENST00000438864 766 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 DDX3P2-201ENST00000446138 111 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 MTND2P24-201ENST00000453434 806 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC092155.2-201ENST00000454675 477 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC021382.1-201ENST00000483523 359 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 UBE2V1P12-201ENST00000503954 474 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 RNA5SP282-201ENST00000516355 108 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 SCARNA15.2-201ENST00000516409 127 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 RNA5SP82-201ENST00000516707 92 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC124947.2-202ENST00000552735 133 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AMZ2P1-203ENST00000565833 850 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC009163.5-201ENST00000575421 637 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC079089.3-201ENST00000603094 673 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AL645944.1-201ENST00000603857 493 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC103710.4-201ENST00000609301 899 ntBASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.99
CCDC50Q8IVM0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 RNU6-637P-201ENST00000384050 107 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 SNORA11.1-201ENST00000408133 129 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 U3.37-201ENST00000408528 213 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 ARL5AP4-201ENST00000430731 512 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 COX7BP2-201ENST00000437976 242 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 FGF7P5-201ENST00000441829 291 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 PTENP1-201ENST00000447117 1215 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC034159.1-201ENST00000513885 583 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC243972.3-201ENST00000539655 198 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 GTF3AP2-201ENST00000557014 266 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AL137843.1-201ENST00000605078 385 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AL161629.2-201ENST00000615347 275 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 PABPC1P9-201ENST00000426076 1612 ntBASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CCDC50Q8IVM0 AC093536.2-201ENST00000565257 1406 ntBASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 SNORA23-201ENST00000365128 182 ntBASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 SNORA9-201ENST00000384215 133 ntBASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 RNU2-25P-201ENST00000411041 191 ntBASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 SPA17P1-201ENST00000416656 452 ntBASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 MTCO2P17-201ENST00000424336 677 ntBASIC2.63□□□□□ -1.99
CCDC50Q8IVM0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms