Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 RNU6-920P-201ENST00000410926 92 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 MTCO1P17-201ENST00000411522 491 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC233728.2-201ENST00000425348 757 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 SNRPEP4-201ENST00000435815 279 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AP000542.1-201ENST00000448473 371 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 RPL30P9-201ENST00000465586 330 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AP001025.2-201ENST00000490908 477 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC087373.1-201ENST00000524920 491 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC018630.1-201ENST00000541376 925 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 GTF3AP2-201ENST00000557014 266 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AL157394.1-201ENST00000562983 1224 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC011260.1-201ENST00000578420 472 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 COX6CP3-201ENST00000580869 223 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 BNIP3P23-201ENST00000599655 511 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 Z99497.2-201ENST00000603634 310 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 MTCYBP22-201ENST00000603788 447 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC107214.2-201ENST00000608204 634 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC131902.3-201ENST00000611767 581 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 MIR7844-201ENST00000616161 122 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC002076.2-201ENST00000617362 122 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC092192.1-201ENST00000633154 1018 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 MIR3974-201ENST00000637126 96 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 MTND4P16-201ENST00000466108 1367 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AC096644.4-201ENST00000563417 2912 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 FAM35BP-202ENST00000497389 3337 ntBASIC2.94□□□□□ -1.94
RFWD3Q6PCD5 AP003122.5-201ENST00000527668 3766 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 SNORA5B-201ENST00000363786 132 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 RNU6-1207P-201ENST00000384343 107 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 RNU2-47P-201ENST00000410649 186 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC009518.2-201ENST00000418056 731 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC090960.1-201ENST00000421072 306 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 Z99497.1-201ENST00000421282 135 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL645937.1-202ENST00000421799 937 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 MTATP6P4-201ENST00000427725 675 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 RSU1P2-202ENST00000437884 485 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 RPS24P13-201ENST00000442520 397 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC112653.1-201ENST00000443851 386 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 Y_RNA.688-201ENST00000516565 95 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 RNU6-56P-201ENST00000516986 93 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC079600.2-201ENST00000550076 130 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC034105.3-201ENST00000565294 442 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 MIR3915-201ENST00000578518 97 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 MIR544B-201ENST00000582372 78 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 WISP1-OT1-201ENST00000602893 642 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AC112187.2-201ENST00000604345 283 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL031176.1-201ENST00000604554 466 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL356266.1-201ENST00000623311 483 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
RFWD3Q6PCD5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 GABRG2-229ENST00000641017 3628 ntBASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 RNU1-35P-201ENST00000362782 153 ntBASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 RNU6-97P-201ENST00000363387 104 ntBASIC2.92□□□□□ -1.94
RFWD3Q6PCD5 MIR181A2-201ENST00000384863 110 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms