Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR6853-201ENST00000619642 74 ntBASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 PRO1804-201ENST00000623780 2050 ntBASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC005332.5-201ENST00000591222 2919 ntBASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1Q5Y7H0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-99P-201ENST00000364721 107 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 SNORA71.2-201ENST00000364941 134 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-76P-201ENST00000384060 104 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR517A-201ENST00000385001 87 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-882P-201ENST00000391025 103 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 OR2AH1P-201ENST00000425717 928 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 HMGB1P9-201ENST00000429856 646 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL158071.1-201ENST00000430315 461 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC073063.1-201ENST00000434352 607 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC005154.2-201ENST00000438110 379 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 PRDX3P3-201ENST00000447765 522 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RPL29P29-201ENST00000448725 423 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC092451.1-201ENST00000480211 153 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC068781.1-201ENST00000488231 618 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RN7SL591P-201ENST00000496150 292 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 MTND3P25-201ENST00000509243 135 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU4-77P-201ENST00000516692 156 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-914P-201ENST00000516749 109 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR4472-2-201ENST00000582069 67 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-85P-201ENST00000605989 107 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 SNORD58B-201ENST00000607313 66 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 ZNF285B-201ENST00000561698 1767 ntBASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1Q5Y7H0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL450326.2-201ENST00000421913 1962 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-1329P-201ENST00000365664 107 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 Y_RNA.480-201ENST00000384364 102 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 SNORA41-201ENST00000384675 132 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 MIR578-201ENST00000384828 96 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 SNORD73A-201ENST00000386062 65 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-823P-201ENST00000391042 103 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AP000580.1-201ENST00000404439 358 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL080315.1-201ENST00000406055 466 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-101P-201ENST00000410323 104 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU2-23P-201ENST00000410545 195 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 CKS1BP6-201ENST00000424932 240 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 UBE2V1P4-201ENST00000425374 344 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL049745.1-201ENST00000433953 286 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL121871.1-201ENST00000443413 436 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL589765.3-201ENST00000446084 462 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC079168.2-201ENST00000453977 416 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AL353752.1-201ENST00000454946 260 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC010655.3-201ENST00000478818 450 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC020890.1-201ENST00000491837 504 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 SCARNA22-201ENST00000503991 125 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 MRPS35P2-201ENST00000508242 191 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 OR7H2P-201ENST00000513483 306 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 GMPSP1-201ENST00000514075 579 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 RNU6-307P-201ENST00000516743 106 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 AC009812.2-201ENST00000517657 457 ntBASIC4.38□□□□□ -1.71
HLA-DQA1Q5Y7H0 IGKV1-32-201ENST00000519290 311 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms