Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AL138976.2-201ENST00000563989 694 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC015917.1-201ENST00000579654 510 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC091135.1-201ENST00000585943 307 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC010928.3-201ENST00000587712 541 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 BNIP3P30-201ENST00000601184 574 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AL035413.2-201ENST00000604801 525 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 BNIP3P10-201ENST00000605360 577 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 LARP7P1-201ENST00000605576 316 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 RMST_3.1-201ENST00000611651 109 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 AC079684.1-201ENST00000621405 437 ntBASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD3Q3KNS1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 RNU6-1068P-201ENST00000410958 103 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 DUTP6-201ENST00000425573 462 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 CYCSP43-201ENST00000438233 310 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC083863.1-201ENST00000438811 231 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AL671855.1-201ENST00000446875 1203 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 MTND1P18-201ENST00000448191 573 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 RPS20P20-201ENST00000460498 340 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 RN7SKP219-201ENST00000516825 296 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AL360157.1-201ENST00000565962 87 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 BNIP3P9-201ENST00000603714 553 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC007998.5-201ENST00000622938 237 ntBASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD3Q3KNS1 AC092326.2-201ENST00000624772 1561 ntBASIC3.84□□□□□ -1.8
PTCHD3Q3KNS1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD3Q3KNS1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD3Q3KNS1 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.8
PTCHD3Q3KNS1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 XIAPP3-201ENST00000312918 795 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 Y_RNA.72-201ENST00000362894 103 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 RNU6-173P-201ENST00000364215 104 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 SNORA62.1-201ENST00000364287 154 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 SNORA24.1-201ENST00000384401 135 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AL356776.1-201ENST00000406574 447 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 ZNF863P-201ENST00000426746 417 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 ATP5JP1-201ENST00000431631 322 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 RPL36AP53-201ENST00000432891 316 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC024082.2-201ENST00000434771 238 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 USP9YP7-201ENST00000436723 430 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 RPL26P6-201ENST00000440913 438 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 USP9YP32-201ENST00000452432 430 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC078817.1-201ENST00000492623 435 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC026726.1-201ENST00000512859 601 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC046134.1-201ENST00000514454 666 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 Vault.1-201ENST00000516474 102 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 RNA5SP179-201ENST00000517284 121 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 ERHP1-201ENST00000523006 310 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 CENPUP1-201ENST00000526649 1202 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AP005435.4-201ENST00000529514 284 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC107016.1-201ENST00000550463 337 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 FAM60BP-201ENST00000578364 658 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC005730.3-201ENST00000583067 366 ntBASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD3Q3KNS1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms