Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 snoU13.7-201ENST00000459220 104 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AC133134.1-201ENST00000466800 359 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 RPS4XP22-201ENST00000480755 780 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AP001025.1-201ENST00000486139 332 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AC016065.2-201ENST00000514530 444 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 RNA5SP373-201ENST00000517271 95 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 MIR5696-201ENST00000578474 85 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 MIR3684-201ENST00000579779 74 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AC008785.1-201ENST00000624475 456 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 SNURFL-201ENST00000309296 343 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 RNU6-1284P-201ENST00000363701 100 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 SNORD82-201ENST00000365530 70 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 RNU6-1289P-201ENST00000384431 106 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 SNORA20-201ENST00000384662 132 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 RNU6-516P-201ENST00000411381 104 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 GNG5P5-201ENST00000420444 220 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 RPS15AP6-201ENST00000420703 385 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 RPS11P1-201ENST00000451072 473 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 Z92846.1-201ENST00000456203 268 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 CYCSP26-201ENST00000534107 320 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 MIR4659A-201ENST00000580269 81 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC174048.1-201ENST00000603389 144 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 SNORD39.4-201ENST00000620099 78 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 AC020656.2-201ENST00000613291 5309 ntBASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CTC1Q2NKJ3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 Y_RNA.569-201ENST00000384749 103 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 RNF10P1-201ENST00000418589 369 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 MTATP6P4-201ENST00000427725 675 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 RPS17P13-201ENST00000448974 407 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 AL353691.1-201ENST00000451332 387 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 RN7SL459P-201ENST00000481078 302 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 AC008033.2-201ENST00000542626 177 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 TGIF1P1-201ENST00000558095 802 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 MIR548X2-201ENST00000579776 100 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 AC010632.3-201ENST00000611377 369 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 AP000346.3-201ENST00000622821 210 ntBASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CTC1Q2NKJ3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 Y_RNA.309-201ENST00000365046 111 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms