Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC233728.2-201ENST00000425348 757 ntBASIC1.23□□□□□ -2.21
CACNA1EQ15878 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.23□□□□□ -2.21
CACNA1EQ15878 RPS23P3-201ENST00000470993 430 ntBASIC1.23□□□□□ -2.21
CACNA1EQ15878 CR383656.8-201ENST00000549046 145 ntBASIC1.23□□□□□ -2.21
CACNA1EQ15878 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.23□□□□□ -2.21
CACNA1EQ15878 AL590095.2-201ENST00000604136 117 ntBASIC1.23□□□□□ -2.21
CACNA1EQ15878 AC008962.1-201ENST00000605729 304 ntBASIC1.23□□□□□ -2.21
CACNA1EQ15878 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CACNA1EQ15878 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CACNA1EQ15878 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1EQ15878 RNU1-133P-201ENST00000364867 167 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.22□□□□□ -2.21
CACNA1EQ15878 AL078601.1-201ENST00000444542 271 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1EQ15878 RNA5SP82-201ENST00000516707 92 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 RNA5SP337-201ENST00000517007 109 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC109635.4-202ENST00000531666 412 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC096772.1-201ENST00000609146 564 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AL161734.1-201ENST00000609720 557 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.22□□□□□ -2.21
CACNA1EQ15878 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC009541.1-201ENST00000438279 2662 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1EQ15878 RNU6-600P-201ENST00000362524 99 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 RNA5SP257-201ENST00000363023 116 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 MIR193B-201ENST00000384907 83 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AL033519.2-201ENST00000403958 392 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 EBAG9P1-201ENST00000418955 543 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC234781.2-201ENST00000426370 994 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.22□□□□□ -2.21
CACNA1EQ15878 RNU1-104P-201ENST00000517280 175 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CACNA1EQ15878 GLUD1P4-201ENST00000590914 418 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AL161912.3-201ENST00000605404 628 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AC090740.1-201ENST00000623193 2262 ntBASIC1.22□□□□□ -2.21
CACNA1EQ15878 AP001350.1-201ENST00000601906 1524 ntBASIC1.21□□□□□ -2.21
CACNA1EQ15878 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1EQ15878 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC007560.1-201ENST00000426912 237 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 PSMA2P3-201ENST00000429685 675 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 IFNA20P-201ENST00000436840 528 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 HMGB1P46-201ENST00000520062 610 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AL133507.1-201ENST00000605269 557 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 uc_338.9-201ENST00000617424 182 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC007275.1-201ENST00000621243 671 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1EQ15878 AP000560.1-201ENST00000624150 1937 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 SUMO1P4-201ENST00000429430 302 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 NF1P3-201ENST00000457709 450 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC093801.2-201ENST00000503966 1050 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC097504.2-201ENST00000608088 454 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC112503.2-201ENST00000609005 552 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 MIR6840-201ENST00000611937 71 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC245884.12-201ENST00000615364 59 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC140725.3-201ENST00000616193 880 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 AC010809.3-201ENST00000621310 641 ntBASIC1.21□□□□□ -2.22
CACNA1EQ15878 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.21□□□□□ -2.22
CACNA1EQ15878 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CACNA1EQ15878 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CACNA1EQ15878 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CACNA1EQ15878 RNU2-40P-201ENST00000410833 196 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.2□□□□□ -2.22
CACNA1EQ15878 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.2□□□□□ -2.22
CACNA1EQ15878 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1EQ15878 DUXAP8-207ENST00000456786 622 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 NCOR1P1-202ENST00000486162 291 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC022690.1-201ENST00000526681 550 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 OR4R1P-201ENST00000529879 463 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AL138976.2-201ENST00000563989 694 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 MIR1273G-201ENST00000577677 100 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 RPS15AP11-201ENST00000594193 385 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC016252.1-201ENST00000609721 474 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 MIR4496-201ENST00000635896 61 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CACNA1EQ15878 RPL26P37-201ENST00000411983 438 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 SNRPEP4-201ENST00000435815 279 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.2□□□□□ -2.22
CACNA1EQ15878 AL121871.1-201ENST00000443413 436 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AP002371.1-201ENST00000463604 433 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC092902.1-201ENST00000486999 259 ntBASIC1.2□□□□□ -2.22
CACNA1EQ15878 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms