Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-1257P-201ENST00000384625 110 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 RNU6-253P-201ENST00000384730 105 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 MIR524-201ENST00000385242 87 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.84□□□□□ -2.11
FOXF1Q12946 RNU2-15P-201ENST00000410692 191 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 AC019070.1-201ENST00000415008 1024 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AL356320.2-201ENST00000417263 507 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 USP9YP21-201ENST00000420603 432 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.84□□□□□ -2.11
FOXF1Q12946 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC027124.2-201ENST00000428249 105 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 GTF2IP7-202ENST00000436677 309 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 DPPA3P1-201ENST00000448050 469 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.84□□□□□ -2.11
FOXF1Q12946 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
FOXF1Q12946 RNU6-1261P-201ENST00000517194 104 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC087808.1-201ENST00000520501 361 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 IGKV3-31-201ENST00000523109 329 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 MTCO3P15-201ENST00000526563 574 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 DEFB108D-201ENST00000527787 222 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.84□□□□□ -2.11
FOXF1Q12946 CYB5AP5-201ENST00000549779 389 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF1Q12946 HSPE1P3-201ENST00000559254 309 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC009314.1-201ENST00000603871 304 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AL022099.1-201ENST00000604551 712 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC097504.2-201ENST00000608088 454 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.84□□□□□ -2.11
FOXF1Q12946 AC092954.1-201ENST00000609121 445 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AP001521.1-201ENST00000609150 300 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AP000254.1-201ENST00000609934 520 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AP003485.1-201ENST00000625093 753 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 AC110079.1-202ENST00000635213 138 ntBASIC1.84□□□□□ -2.11
FOXF1Q12946 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.84□□□□□ -2.11
FOXF1Q12946 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
FOXF1Q12946 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
FOXF1Q12946 RNU6-657P-201ENST00000383904 107 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 RNU6-882P-201ENST00000391025 103 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXF1Q12946 RNF2P1-201ENST00000442955 1010 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 MTCYBP42-201ENST00000444653 1130 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC009237.8-201ENST00000445492 379 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 VN1R10P-201ENST00000447106 875 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXF1Q12946 AC104164.3-201ENST00000467363 1258 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 RPL30P5-201ENST00000494923 336 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC106872.3-201ENST00000495104 446 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXF1Q12946 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
FOXF1Q12946 AC010460.2-201ENST00000509054 677 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AL359273.1-201ENST00000510918 627 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
FOXF1Q12946 OR5AK1P-201ENST00000524837 922 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AP001189.2-201ENST00000527320 189 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 DEFB130C-202ENST00000530001 230 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC092451.2-201ENST00000538746 658 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC087897.1-201ENST00000550134 156 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXF1Q12946 OR4K7P-201ENST00000580232 945 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC008507.2-201ENST00000588402 1176 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC008739.2-201ENST00000597006 317 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 RPL21P136-201ENST00000605378 396 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC099785.1-201ENST00000605697 437 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC080013.4-201ENST00000607624 649 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC079597.1-201ENST00000624306 508 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 AC110994.2-201ENST00000635481 492 ntBASIC1.83□□□□□ -2.12
FOXF1Q12946 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
FOXF1Q12946 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXF1Q12946 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXF1Q12946 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
FOXF1Q12946 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
FOXF1Q12946 AL596028.1-201ENST00000326971 197 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 Y_RNA.25-201ENST00000362528 102 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 RNU6-216P-201ENST00000363282 104 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
FOXF1Q12946 SNORD65.1-201ENST00000390889 71 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 RNU6-1197P-201ENST00000391183 107 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 MCTS2P-201ENST00000394552 546 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
FOXF1Q12946 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXF1Q12946 MTCO1P3-201ENST00000429327 192 ntBASIC1.82□□□□□ -2.12
FOXF1Q12946 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.82□□□□□ -2.12
FOXF1Q12946 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.82□□□□□ -2.12
FOXF1Q12946 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms