Protein–RNA interactions for Protein: Q12873

CHD3, Chromodomain-helicase-DNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3Q12873 snoZ278.1-201ENST00000517059 112 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD3Q12873 RPS3AP4-201ENST00000555161 764 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 EIF1AXP2-201ENST00000555940 413 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC010546.1-201ENST00000569391 485 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD3Q12873 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD3Q12873 AL035411.2-201ENST00000604022 421 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC025016.1-201ENST00000616746 682 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CHD3Q12873 AC008669.1-201ENST00000565823 2178 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.57□□□□□ -2.16
CHD3Q12873 SGO1P2-201ENST00000429458 1589 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 Y_RNA.493-201ENST00000384422 102 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
CHD3Q12873 RNA5SP489-201ENST00000410986 109 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AL356379.1-201ENST00000414105 126 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD3Q12873 OSTCP8-201ENST00000445117 448 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 PSPHP1-201ENST00000450062 261 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 BX322784.1-201ENST00000455793 1077 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC097493.1-201ENST00000463958 372 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 RPS15AP34-201ENST00000487776 387 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD3Q12873 AC025755.1-201ENST00000521306 278 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD3Q12873 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD3Q12873 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD3Q12873 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD3Q12873 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.57□□□□□ -2.16
CHD3Q12873 OR4G1P-201ENST00000588632 938 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.57□□□□□ -2.16
CHD3Q12873 XIAPP1-201ENST00000603162 600 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AL355812.1-201ENST00000603215 216 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 MIR6504-201ENST00000613520 61 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 AC010678.1-201ENST00000614118 713 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD3Q12873 OR5H6-203ENST00000642105 978 ntBASIC1.57□□□□□ -2.16
CHD3Q12873 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CHD3Q12873 SDAD1P2-201ENST00000441308 2028 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 MIR421-201ENST00000365696 85 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 RNU6-1226P-201ENST00000384317 107 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 RNU6-452P-201ENST00000384406 107 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 ARF4P4-201ENST00000439608 520 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC009237.8-201ENST00000445492 379 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC092155.2-201ENST00000454675 477 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC092798.1-201ENST00000458542 409 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD3Q12873 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD3Q12873 ARL2BPP2-201ENST00000550907 489 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHD3Q12873 ANP32BP3-201ENST00000559213 706 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD3Q12873 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC107214.2-201ENST00000608204 634 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHD3Q12873 UBE2L2-201ENST00000254302 429 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC098614.2-201ENST00000426040 255 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 UBE2V1P13-201ENST00000436983 439 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AL445687.1-201ENST00000439946 251 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 RPL7P18-201ENST00000478965 734 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC104685.1-201ENST00000502445 371 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 IGKV2D-36-201ENST00000518643 226 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC104581.2-201ENST00000572227 430 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 SNORA4-201ENST00000584302 138 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 AC073569.3-201ENST00000619055 682 ntBASIC1.56□□□□□ -2.16
CHD3Q12873 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD3Q12873 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD3Q12873 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD3Q12873 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD3Q12873 RNU2-20P-201ENST00000410425 191 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AL356320.2-201ENST00000417263 507 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD3Q12873 AC018630.2-202ENST00000422992 927 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 DNAJC19P4-201ENST00000440115 345 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD3Q12873 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AP002345.1-201ENST00000456493 928 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 OR52A4P-202ENST00000481634 799 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AC104564.1-201ENST00000493028 407 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AC092436.3-201ENST00000511788 257 ntBASIC1.55□□□□□ -2.16
CHD3Q12873 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD3Q12873 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms