Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNX5P1-201ENST00000505757 1041 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 LRRC34P2-201ENST00000514850 553 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 RNU1-92P-201ENST00000517017 135 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 AP003072.2-201ENST00000527756 676 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.74□□□□□ -2.29
HSPG2P98160 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.74□□□□□ -2.29
HSPG2P98160 PABPC1P7-201ENST00000413177 1513 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
HSPG2P98160 RNU6-997P-201ENST00000384725 107 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.74□□□□□ -2.29
HSPG2P98160 SNRPGP13-201ENST00000442212 177 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 AC104308.1-201ENST00000454621 333 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 AC025918.2-201ENST00000558683 763 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 AC009318.3-201ENST00000616916 503 ntBASIC0.74□□□□□ -2.29
HSPG2P98160 TXNP7-201ENST00000406296 293 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AC073264.1-201ENST00000411508 416 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.73□□□□□ -2.29
HSPG2P98160 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
HSPG2P98160 TEX21P-201ENST00000447107 1476 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 RNU6-716P-201ENST00000365621 103 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 HAUS1P1-201ENST00000505275 832 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 SMARCE1P4-201ENST00000523647 241 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AC140725.3-201ENST00000616193 880 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AL589935.2-201ENST00000616471 1231 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.73□□□□□ -2.29
HSPG2P98160 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.73□□□□□ -2.29
HSPG2P98160 AC110792.2-201ENST00000510278 224 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AL161713.1-201ENST00000555538 145 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.73□□□□□ -2.29
HSPG2P98160 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HSPG2P98160 BX682237.1-201ENST00000415016 335 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AL357078.2-201ENST00000416486 427 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.73□□□□□ -2.29
HSPG2P98160 CR848007.2-201ENST00000424918 787 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 UBE2V1P13-201ENST00000436983 439 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
HSPG2P98160 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HSPG2P98160 AC113368.1-201ENST00000603736 382 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 MTND4LP5-201ENST00000605152 292 ntBASIC0.73□□□□□ -2.29
HSPG2P98160 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.73□□□□□ -2.29
HSPG2P98160 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
HSPG2P98160 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HSPG2P98160 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.72□□□□□ -2.29
HSPG2P98160 MTCO1P47-201ENST00000523889 1271 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 DEFB108E-201ENST00000524692 240 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC118942.1-201ENST00000529674 1035 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 MIR4295-201ENST00000585286 85 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AL512605.2-201ENST00000592972 256 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.72□□□□□ -2.29
HSPG2P98160 MFSD8-213ENST00000641134 1327 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 CBX3P6-201ENST00000430257 527 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.72□□□□□ -2.29
HSPG2P98160 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.72□□□□□ -2.29
HSPG2P98160 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HSPG2P98160 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.72□□□□□ -2.29
HSPG2P98160 ARPC3P2-201ENST00000457786 533 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 RPL21P93-201ENST00000480465 489 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC233702.1-201ENST00000482905 502 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC093591.1-201ENST00000491435 481 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC093752.1-206ENST00000511823 336 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 SNORA31.23-201ENST00000517219 133 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC233266.2-201ENST00000567067 528 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 MIR6086-201ENST00000638065 55 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.72□□□□□ -2.29
HSPG2P98160 AC138915.1-201ENST00000565427 1685 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 RPL31P58-201ENST00000469001 379 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.72□□□□□ -2.29
HSPG2P98160 RNU4-60P-201ENST00000517239 135 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC009229.3-201ENST00000608056 282 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 MIR6513-201ENST00000621188 64 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 AC091932.3-201ENST00000624223 323 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
HSPG2P98160 MTND4P34-201ENST00000572715 1371 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 RNF6P1-201ENST00000444889 1784 ntBASIC0.72□□□□□ -2.29
HSPG2P98160 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HSPG2P98160 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HSPG2P98160 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.71□□□□□ -2.3
HSPG2P98160 AC023424.2-201ENST00000493479 777 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.71□□□□□ -2.3
HSPG2P98160 AC006338.1-201ENST00000618453 749 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AC090517.3-201ENST00000625170 141 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 MIR338-201ENST00000636369 67 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 RPL7P27-201ENST00000403775 720 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 SUMO2P12-201ENST00000405924 140 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.71□□□□□ -2.3
HSPG2P98160 HMGB3P10-201ENST00000434734 572 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.71□□□□□ -2.3
HSPG2P98160 OR6K5P-201ENST00000447050 945 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 FO393415.2-201ENST00000480085 343 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 OR9N1P-202ENST00000494289 481 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.71□□□□□ -2.3
HSPG2P98160 GLUD1P4-201ENST00000590914 418 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HSPG2P98160 AC097655.1-201ENST00000635075 318 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.71□□□□□ -2.3
HSPG2P98160 ZNF734P-201ENST00000419494 1534 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms