Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.57□□□□□ -2.32
RPL39P62891 MIR4698-201ENST00000577795 80 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AC013553.2-201ENST00000604244 589 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AC128687.1-201ENST00000605304 619 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AL391813.2-201ENST00000609113 322 ntBASIC0.57□□□□□ -2.32
RPL39P62891 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL39P62891 AC025594.3-201ENST00000613068 790 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AC106800.4-201ENST00000614905 153 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AC087821.2-201ENST00000637086 450 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AP000776.1-201ENST00000530032 1663 ntBASIC0.56□□□□□ -2.32
RPL39P62891 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
RPL39P62891 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RPL39P62891 RNU1-148P-201ENST00000384472 162 ntBASIC0.56□□□□□ -2.32
RPL39P62891 RN7SKP61-201ENST00000410642 295 ntBASIC0.56□□□□□ -2.32
RPL39P62891 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.56□□□□□ -2.32
RPL39P62891 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.56□□□□□ -2.32
RPL39P62891 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.56□□□□□ -2.32
RPL39P62891 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.56□□□□□ -2.32
RPL39P62891 AC092047.1-201ENST00000424997 240 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AC108667.1-201ENST00000428618 249 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AL365400.1-201ENST00000431854 640 ntBASIC0.56□□□□□ -2.32
RPL39P62891 DYNLT3P2-201ENST00000442517 295 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.56□□□□□ -2.32
RPL39P62891 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.56□□□□□ -2.32
RPL39P62891 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
RPL39P62891 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.56□□□□□ -2.32
RPL39P62891 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.56□□□□□ -2.32
RPL39P62891 AP001804.3-201ENST00000525146 880 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.56□□□□□ -2.32
RPL39P62891 LINC00933-203ENST00000559812 219 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AL731537.2-201ENST00000561565 951 ntBASIC0.56□□□□□ -2.32
RPL39P62891 MTND2P13-201ENST00000577438 1039 ntBASIC0.56□□□□□ -2.32
RPL39P62891 MIR3945-201ENST00000581853 98 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.56□□□□□ -2.32
RPL39P62891 AC025165.5-201ENST00000602802 578 ntBASIC0.56□□□□□ -2.32
RPL39P62891 HSPE1P19-201ENST00000603327 295 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AC135507.1-201ENST00000607214 561 ntBASIC0.56□□□□□ -2.32
RPL39P62891 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.56□□□□□ -2.32
RPL39P62891 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RPL39P62891 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RPL39P62891 RNU6-50P-201ENST00000362356 103 ntBASIC0.55□□□□□ -2.32
RPL39P62891 MIR532-201ENST00000385025 91 ntBASIC0.55□□□□□ -2.32
RPL39P62891 MIR764-201ENST00000390811 85 ntBASIC0.55□□□□□ -2.32
RPL39P62891 RPL17P50-201ENST00000396131 546 ntBASIC0.55□□□□□ -2.32
RPL39P62891 MIR1261-201ENST00000408659 82 ntBASIC0.55□□□□□ -2.32
RPL39P62891 AC013404.1-201ENST00000413068 249 ntBASIC0.55□□□□□ -2.32
RPL39P62891 AIMP1P2-201ENST00000425294 312 ntBASIC0.55□□□□□ -2.32
RPL39P62891 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.55□□□□□ -2.32
RPL39P62891 TRIM60P13-201ENST00000432350 1283 ntBASIC0.55□□□□□ -2.32
RPL39P62891 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.55□□□□□ -2.32
RPL39P62891 AC079448.1-201ENST00000449377 373 ntBASIC0.55□□□□□ -2.32
RPL39P62891 HMGB1P26-201ENST00000452520 628 ntBASIC0.55□□□□□ -2.32
RPL39P62891 COX6CP14-201ENST00000469580 174 ntBASIC0.55□□□□□ -2.32
RPL39P62891 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.55□□□□□ -2.32
RPL39P62891 AC112198.4-201ENST00000515450 351 ntBASIC0.55□□□□□ -2.32
RPL39P62891 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.55□□□□□ -2.32
RPL39P62891 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC0.55□□□□□ -2.32
RPL39P62891 AL391987.6-201ENST00000305671 199 ntBASIC0.54□□□□□ -2.32
RPL39P62891 MIR515-2-201ENST00000384883 83 ntBASIC0.54□□□□□ -2.32
RPL39P62891 MIR515-1-201ENST00000384884 83 ntBASIC0.54□□□□□ -2.32
RPL39P62891 MIR92A2-201ENST00000385299 75 ntBASIC0.54□□□□□ -2.32
RPL39P62891 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.54□□□□□ -2.32
RPL39P62891 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.54□□□□□ -2.32
RPL39P62891 BTF3P4-201ENST00000418852 495 ntBASIC0.54□□□□□ -2.32
RPL39P62891 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.54□□□□□ -2.32
RPL39P62891 ARL2BPP4-201ENST00000506854 471 ntBASIC0.54□□□□□ -2.32
RPL39P62891 SNORA31.13-201ENST00000516624 135 ntBASIC0.54□□□□□ -2.32
RPL39P62891 RN7SKP82-201ENST00000516786 223 ntBASIC0.54□□□□□ -2.32
RPL39P62891 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
RPL39P62891 OR6C73P-201ENST00000546432 358 ntBASIC0.54□□□□□ -2.32
RPL39P62891 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.54□□□□□ -2.32
RPL39P62891 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.54□□□□□ -2.32
RPL39P62891 VN1R80P-201ENST00000597126 338 ntBASIC0.54□□□□□ -2.32
RPL39P62891 AL450336.1-201ENST00000605180 586 ntBASIC0.54□□□□□ -2.32
RPL39P62891 AC012360.2-201ENST00000609349 391 ntBASIC0.54□□□□□ -2.32
RPL39P62891 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.54□□□□□ -2.32
RPL39P62891 MIR6866-201ENST00000638146 69 ntBASIC0.54□□□□□ -2.32
RPL39P62891 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
RPL39P62891 AL138880.1-201ENST00000405824 642 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.53□□□□□ -2.32
RPL39P62891 AC004022.2-201ENST00000413824 193 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AC244098.2-201ENST00000422068 99 ntBASIC0.53□□□□□ -2.32
RPL39P62891 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.53□□□□□ -2.32
RPL39P62891 AC004383.1-201ENST00000438135 289 ntBASIC0.53□□□□□ -2.32
RPL39P62891 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.53□□□□□ -2.32
RPL39P62891 RPL31P60-201ENST00000478450 367 ntBASIC0.53□□□□□ -2.32
RPL39P62891 HMGB1P38-201ENST00000490557 577 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AC010627.1-201ENST00000503819 1294 ntBASIC0.53□□□□□ -2.32
RPL39P62891 YWHAEP4-201ENST00000505390 198 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
RPL39P62891 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC0.53□□□□□ -2.32
RPL39P62891 RNU6-1073P-201ENST00000517182 106 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.53□□□□□ -2.32
RPL39P62891 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
RPL39P62891 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.53□□□□□ -2.32
RPL39P62891 AC090616.5-202ENST00000582111 297 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.53□□□□□ -2.32
RPL39P62891 AC067838.1-201ENST00000606064 577 ntBASIC0.53□□□□□ -2.32
RPL39P62891 AP001350.1-201ENST00000601906 1524 ntBASIC0.53□□□□□ -2.33
RPL39P62891 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms