Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LIM2P55344 AL109755.1-201ENST00000401791 649 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AL592148.1-201ENST00000413568 445 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LIM2P55344 RPL7L1P10-201ENST00000427790 463 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC087499.2-201ENST00000432861 149 ntBASIC2.62□□□□□ -1.99
LIM2P55344 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AL117351.1-201ENST00000438864 766 ntBASIC2.62□□□□□ -1.99
LIM2P55344 RPS24P13-201ENST00000442520 397 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 ATG12P2-201ENST00000456830 416 ntBASIC2.62□□□□□ -1.99
LIM2P55344 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 RPL23AP11-201ENST00000475260 469 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC103975.1-201ENST00000482506 483 ntBASIC2.62□□□□□ -1.99
LIM2P55344 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LIM2P55344 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LIM2P55344 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.62□□□□□ -1.99
LIM2P55344 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.62□□□□□ -1.99
LIM2P55344 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.62□□□□□ -1.99
LIM2P55344 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
LIM2P55344 ELOCP32-201ENST00000548625 324 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC124947.2-202ENST00000552735 133 ntBASIC2.62□□□□□ -1.99
LIM2P55344 OR4T1P-201ENST00000554933 911 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC060771.1-201ENST00000582031 164 ntBASIC2.62□□□□□ -1.99
LIM2P55344 MIR544B-201ENST00000582372 78 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC005046.1-201ENST00000608515 625 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC079395.3-201ENST00000615161 484 ntBASIC2.62□□□□□ -1.99
LIM2P55344 AC027309.3-201ENST00000623419 351 ntBASIC2.62□□□□□ -1.99
LIM2P55344 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.62□□□□□ -1.99
LIM2P55344 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.62□□□□□ -1.99
LIM2P55344 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.62□□□□□ -1.99
LIM2P55344 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
LIM2P55344 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LIM2P55344 AL161431.1-201ENST00000618966 4205 ntBASIC2.61□□□□□ -1.99
LIM2P55344 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LIM2P55344 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
LIM2P55344 SNORA23-201ENST00000365128 182 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RNU1-101P-201ENST00000391171 127 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AL354719.1-201ENST00000406535 843 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.61□□□□□ -1.99
LIM2P55344 AL445669.1-201ENST00000426743 755 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC008850.1-201ENST00000427546 362 ntBASIC2.61□□□□□ -1.99
LIM2P55344 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.61□□□□□ -1.99
LIM2P55344 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.61□□□□□ -1.99
LIM2P55344 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.61□□□□□ -1.99
LIM2P55344 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.61□□□□□ -1.99
LIM2P55344 OR6K1P-201ENST00000456766 971 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RNU6-420P-201ENST00000458780 107 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.61□□□□□ -1.99
LIM2P55344 SETP11-201ENST00000473027 690 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RPL31P60-201ENST00000478450 367 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RN7SL297P-201ENST00000483161 293 ntBASIC2.61□□□□□ -1.99
LIM2P55344 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LIM2P55344 AC097462.2-201ENST00000504623 481 ntBASIC2.61□□□□□ -1.99
LIM2P55344 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.61□□□□□ -1.99
LIM2P55344 HSPE1P23-201ENST00000509838 286 ntBASIC2.61□□□□□ -1.99
LIM2P55344 LTV1P1-201ENST00000510683 1237 ntBASIC2.61□□□□□ -1.99
LIM2P55344 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RNU6-1282P-201ENST00000516735 96 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RNU6-798P-201ENST00000516912 103 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.61□□□□□ -1.99
LIM2P55344 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LIM2P55344 AL133271.1-201ENST00000538229 291 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.61□□□□□ -1.99
LIM2P55344 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.61□□□□□ -1.99
LIM2P55344 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LIM2P55344 MIR3609-201ENST00000582661 80 ntBASIC2.61□□□□□ -1.99
LIM2P55344 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC023043.3-201ENST00000593113 385 ntBASIC2.61□□□□□ -1.99
LIM2P55344 BNIP3P23-201ENST00000599655 511 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AC106791.2-201ENST00000604680 391 ntBASIC2.61□□□□□ -1.99
LIM2P55344 TUG1_2.1-201ENST00000614234 87 ntBASIC2.61□□□□□ -1.99
LIM2P55344 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.61□□□□□ -1.99
LIM2P55344 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.61□□□□□ -1.99
LIM2P55344 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.61□□□□□ -1.99
LIM2P55344 FAM35BP-202ENST00000497389 3337 ntBASIC2.61□□□□□ -1.99
LIM2P55344 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
LIM2P55344 RNU6-500P-201ENST00000362349 107 ntBASIC2.6□□□□□ -1.99
LIM2P55344 SNORA14A-201ENST00000364773 135 ntBASIC2.6□□□□□ -1.99
LIM2P55344 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LIM2P55344 RNU6-741P-201ENST00000383889 107 ntBASIC2.6□□□□□ -1.99
LIM2P55344 TAS2R15P-201ENST00000390674 928 ntBASIC2.6□□□□□ -1.99
LIM2P55344 SNORA48.8-201ENST00000391324 134 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
LIM2P55344 RPL17P12-201ENST00000413391 526 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 COTL1P1-201ENST00000422309 375 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 MTND1P20-201ENST00000430341 950 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.6□□□□□ -1.99
LIM2P55344 GSTA11P-201ENST00000452866 669 ntBASIC2.6□□□□□ -1.99
LIM2P55344 RNU7-59P-201ENST00000459101 61 ntBASIC2.6□□□□□ -1.99
LIM2P55344 RPS20P20-201ENST00000460498 340 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms