Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH13P55290 Z85995.1-201ENST00000415547 335 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH13P55290 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH13P55290 ATP5C1P1-201ENST00000441945 895 ntBASIC3.19□□□□□ -1.9
CDH13P55290 MTND6P13-201ENST00000443510 523 ntBASIC3.19□□□□□ -1.9
CDH13P55290 ST13P20-201ENST00000447996 1065 ntBASIC3.19□□□□□ -1.9
CDH13P55290 Z99127.3-201ENST00000448158 395 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC140076.1-201ENST00000449897 361 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH13P55290 SSXP1-201ENST00000453640 473 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AL033528.1-201ENST00000453780 140 ntBASIC3.19□□□□□ -1.9
CDH13P55290 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH13P55290 RNU6-420P-201ENST00000458780 107 ntBASIC3.19□□□□□ -1.9
CDH13P55290 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH13P55290 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH13P55290 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH13P55290 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
CDH13P55290 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
CDH13P55290 Y_RNA.672-201ENST00000516289 104 ntBASIC3.19□□□□□ -1.9
CDH13P55290 RN7SKP258-201ENST00000517151 304 ntBASIC3.19□□□□□ -1.9
CDH13P55290 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDH13P55290 AC011979.2-201ENST00000527568 352 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH13P55290 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH13P55290 HMGN1P30-201ENST00000589286 268 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC097065.2-201ENST00000608159 533 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC239868.4-201ENST00000608318 671 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
CDH13P55290 AC012442.3-202ENST00000636742 206 ntBASIC3.19□□□□□ -1.9
CDH13P55290 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CDH13P55290 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH13P55290 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH13P55290 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH13P55290 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
CDH13P55290 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH13P55290 OR1S2-201ENST00000302592 978 ntBASIC3.18□□□□□ -1.9
CDH13P55290 RNU6-511P-201ENST00000363496 107 ntBASIC3.18□□□□□ -1.9
CDH13P55290 RNY4P16-201ENST00000364768 94 ntBASIC3.18□□□□□ -1.9
CDH13P55290 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
CDH13P55290 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 AC137499.1-201ENST00000427602 88 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC018644.1-201ENST00000429934 551 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC092573.2-201ENST00000434546 243 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH13P55290 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH13P55290 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 AC122718.1-201ENST00000439448 744 ntBASIC3.18□□□□□ -1.9
CDH13P55290 MTND2P22-201ENST00000444325 1033 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AL133547.1-201ENST00000448546 220 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 SNORD97-201ENST00000459187 142 ntBASIC3.18□□□□□ -1.9
CDH13P55290 FAM133DP-201ENST00000464802 691 ntBASIC3.18□□□□□ -1.9
CDH13P55290 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 LARP1BP2-201ENST00000486594 519 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC080014.1-201ENST00000496877 1201 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC093534.1-201ENST00000504977 132 ntBASIC3.18□□□□□ -1.9
CDH13P55290 TTC39CP1-201ENST00000512513 755 ntBASIC3.18□□□□□ -1.9
CDH13P55290 RNU6-927P-201ENST00000516199 100 ntBASIC3.18□□□□□ -1.9
CDH13P55290 Y_RNA.695-201ENST00000516715 107 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC023632.4-201ENST00000517783 191 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AP003181.2-201ENST00000528941 181 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH13P55290 AL163153.1-201ENST00000554223 283 ntBASIC3.18□□□□□ -1.9
CDH13P55290 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
CDH13P55290 MIR3682-201ENST00000581338 84 ntBASIC3.18□□□□□ -1.9
CDH13P55290 MIR3609-201ENST00000582661 80 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH13P55290 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH13P55290 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH13P55290 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.18□□□□□ -1.9
CDH13P55290 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDH13P55290 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.18□□□□□ -1.9
CDH13P55290 FRG1KP-201ENST00000623592 341 ntBASIC3.18□□□□□ -1.9
CDH13P55290 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH13P55290 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH13P55290 AL161912.2-201ENST00000565707 3007 ntBASIC3.18□□□□□ -1.9
CDH13P55290 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.18□□□□□ -1.9
CDH13P55290 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH13P55290 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
CDH13P55290 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH13P55290 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH13P55290 AL049641.1-201ENST00000441055 1948 ntBASIC3.17□□□□□ -1.9
CDH13P55290 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH13P55290 MIR134-201ENST00000385258 73 ntBASIC3.17□□□□□ -1.9
CDH13P55290 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CDH13P55290 RNA5SP38-201ENST00000410750 119 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RPS3AP3-201ENST00000411933 242 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RPS29P4-201ENST00000414733 161 ntBASIC3.17□□□□□ -1.9
CDH13P55290 ZNF90P2-204ENST00000419323 1075 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC091390.3-201ENST00000426478 338 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RPL23AP69-201ENST00000431134 458 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH13P55290 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH13P55290 AC013267.1-201ENST00000458227 267 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms