Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH12P55289 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH12P55289 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH12P55289 RNU4-48P-201ENST00000365559 182 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC068538.1-201ENST00000376856 336 ntBASIC3.42□□□□□ -1.86
CDH12P55289 RNU6-641P-201ENST00000384006 107 ntBASIC3.42□□□□□ -1.86
CDH12P55289 RNU6-606P-201ENST00000384721 111 ntBASIC3.42□□□□□ -1.86
CDH12P55289 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDH12P55289 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH12P55289 RNU2-39P-201ENST00000410604 198 ntBASIC3.42□□□□□ -1.86
CDH12P55289 RPL30P16-201ENST00000419341 429 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AL109913.1-201ENST00000421173 514 ntBASIC3.42□□□□□ -1.86
CDH12P55289 C4BPAP2-201ENST00000428434 478 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC024082.2-201ENST00000434771 238 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH12P55289 CYCSP43-201ENST00000438233 310 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AL121871.1-201ENST00000443413 436 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH12P55289 VN1R34P-201ENST00000447387 883 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AL356010.1-201ENST00000456364 102 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH12P55289 SNORD97-201ENST00000459187 142 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC006512.1-201ENST00000468816 291 ntBASIC3.42□□□□□ -1.86
CDH12P55289 RPS27AP1-201ENST00000475545 471 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC078817.1-201ENST00000492623 435 ntBASIC3.42□□□□□ -1.86
CDH12P55289 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH12P55289 KLHL2P1-201ENST00000508691 521 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC074344.1-201ENST00000512823 224 ntBASIC3.42□□□□□ -1.86
CDH12P55289 SCARNA14-201ENST00000516903 136 ntBASIC3.42□□□□□ -1.86
CDH12P55289 RNU6-1092P-201ENST00000516955 87 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH12P55289 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH12P55289 AC008011.1-201ENST00000545989 227 ntBASIC3.42□□□□□ -1.86
CDH12P55289 FAM60BP-201ENST00000578364 658 ntBASIC3.42□□□□□ -1.86
CDH12P55289 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH12P55289 MIR378J-201ENST00000611988 109 ntBASIC3.42□□□□□ -1.86
CDH12P55289 AC083809.1-201ENST00000615051 472 ntBASIC3.42□□□□□ -1.86
CDH12P55289 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CDH12P55289 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH12P55289 AC110801.1-201ENST00000623590 212 ntBASIC3.42□□□□□ -1.86
CDH12P55289 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH12P55289 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH12P55289 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.42□□□□□ -1.86
CDH12P55289 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDH12P55289 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH12P55289 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 RNU6-451P-201ENST00000362921 107 ntBASIC3.41□□□□□ -1.86
CDH12P55289 RNY3P3-201ENST00000363816 102 ntBASIC3.41□□□□□ -1.86
CDH12P55289 RNA5SP283-201ENST00000365604 119 ntBASIC3.41□□□□□ -1.86
CDH12P55289 RNU6-877P-201ENST00000383868 107 ntBASIC3.41□□□□□ -1.86
CDH12P55289 MIR454-201ENST00000390180 115 ntBASIC3.41□□□□□ -1.86
CDH12P55289 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 FGF7P8-201ENST00000402994 292 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AL136116.1-201ENST00000403591 381 ntBASIC3.41□□□□□ -1.86
CDH12P55289 SNORA3.3-201ENST00000408712 125 ntBASIC3.41□□□□□ -1.86
CDH12P55289 OR51A5P-201ENST00000415429 942 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC114491.1-201ENST00000416095 246 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AL159169.1-201ENST00000421119 127 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC018630.2-202ENST00000422992 927 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC006989.1-201ENST00000427212 131 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC017083.1-201ENST00000428093 483 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 HSFY6P-201ENST00000445573 403 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH12P55289 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH12P55289 HMGB3P30-201ENST00000457863 606 ntBASIC3.41□□□□□ -1.86
CDH12P55289 RNU7-63P-201ENST00000459054 62 ntBASIC3.41□□□□□ -1.86
CDH12P55289 MRPS17P3-201ENST00000465453 385 ntBASIC3.41□□□□□ -1.86
CDH12P55289 RN7SL323P-201ENST00000494712 295 ntBASIC3.41□□□□□ -1.86
CDH12P55289 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH12P55289 AC116562.3-201ENST00000506136 177 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH12P55289 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 MTCO1P35-201ENST00000515270 228 ntBASIC3.41□□□□□ -1.86
CDH12P55289 SNORA70.14-201ENST00000516205 110 ntBASIC3.41□□□□□ -1.86
CDH12P55289 RNU6-358P-201ENST00000516564 75 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH12P55289 AC068587.5-201ENST00000528506 175 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC118273.2-201ENST00000532092 465 ntBASIC3.41□□□□□ -1.86
CDH12P55289 OR4H12P-201ENST00000556269 907 ntBASIC3.41□□□□□ -1.86
CDH12P55289 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 AC005951.2-201ENST00000576282 495 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC024619.4-201ENST00000580924 316 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH12P55289 AC006116.10-201ENST00000591836 581 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AL136295.6-201ENST00000610486 658 ntBASIC3.41□□□□□ -1.86
CDH12P55289 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH12P55289 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH12P55289 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
CDH12P55289 DUXAP9-208ENST00000622815 614 ntBASIC3.41□□□□□ -1.86
CDH12P55289 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH12P55289 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms