Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK1P49759 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK1P49759 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.3□□□□□ -1.88
CLK1P49759 AC005498.1-201ENST00000592125 465 ntBASIC3.3□□□□□ -1.88
CLK1P49759 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CLK1P49759 AC091805.2-201ENST00000603848 235 ntBASIC3.3□□□□□ -1.88
CLK1P49759 BNIP3P11-201ENST00000603878 563 ntBASIC3.3□□□□□ -1.88
CLK1P49759 RPL23AP88-201ENST00000605759 454 ntBASIC3.3□□□□□ -1.88
CLK1P49759 MIR6798-201ENST00000612887 67 ntBASIC3.3□□□□□ -1.88
CLK1P49759 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK1P49759 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.3□□□□□ -1.88
CLK1P49759 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.3□□□□□ -1.88
CLK1P49759 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK1P49759 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.29□□□□□ -1.88
CLK1P49759 AL049641.1-201ENST00000441055 1948 ntBASIC3.29□□□□□ -1.88
CLK1P49759 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLK1P49759 Y_RNA.6-201ENST00000362350 114 ntBASIC3.29□□□□□ -1.88
CLK1P49759 RNU6ATAC-201ENST00000408749 126 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
CLK1P49759 AL389915.1-201ENST00000422463 466 ntBASIC3.29□□□□□ -1.88
CLK1P49759 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.29□□□□□ -1.88
CLK1P49759 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.29□□□□□ -1.88
CLK1P49759 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
CLK1P49759 snoU13.8-201ENST00000458890 104 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC023598.1-201ENST00000472521 361 ntBASIC3.29□□□□□ -1.88
CLK1P49759 RPL9P33-201ENST00000484311 566 ntBASIC3.29□□□□□ -1.88
CLK1P49759 TMEM251P1-201ENST00000503717 318 ntBASIC3.29□□□□□ -1.88
CLK1P49759 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK1P49759 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 AC002456.2-201ENST00000509356 380 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.29□□□□□ -1.88
CLK1P49759 FABP5P5-201ENST00000515537 406 ntBASIC3.29□□□□□ -1.88
CLK1P49759 RNU6-928P-201ENST00000516876 104 ntBASIC3.29□□□□□ -1.88
CLK1P49759 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.29□□□□□ -1.88
CLK1P49759 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 AC016957.1-201ENST00000534895 309 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
CLK1P49759 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.29□□□□□ -1.88
CLK1P49759 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CLK1P49759 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.29□□□□□ -1.88
CLK1P49759 AC106785.1-201ENST00000565935 262 ntBASIC3.29□□□□□ -1.88
CLK1P49759 MIR4528-201ENST00000577763 90 ntBASIC3.29□□□□□ -1.88
CLK1P49759 MIR4801-201ENST00000582704 82 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.29□□□□□ -1.88
CLK1P49759 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.29□□□□□ -1.88
CLK1P49759 AL589743.7-201ENST00000612637 233 ntBASIC3.29□□□□□ -1.88
CLK1P49759 UCA1.1-201ENST00000620952 75 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC244100.1-202ENST00000621554 382 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AL161637.1-201ENST00000622380 412 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC231657.1-201ENST00000624313 397 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AL603839.4-201ENST00000624658 1005 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AC068137.3-201ENST00000639191 341 ntBASIC3.29□□□□□ -1.88
CLK1P49759 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 AC073869.6-201ENST00000640656 341 ntBASIC3.29□□□□□ -1.88
CLK1P49759 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLK1P49759 AC092447.7-201ENST00000422212 1621 ntBASIC3.29□□□□□ -1.88
CLK1P49759 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK1P49759 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK1P49759 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CLK1P49759 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLK1P49759 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLK1P49759 RNU6-777P-201ENST00000364265 104 ntBASIC3.28□□□□□ -1.88
CLK1P49759 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
CLK1P49759 RNU6-297P-201ENST00000384636 107 ntBASIC3.28□□□□□ -1.88
CLK1P49759 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.28□□□□□ -1.88
CLK1P49759 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK1P49759 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK1P49759 RN7SKP123-201ENST00000410732 291 ntBASIC3.28□□□□□ -1.88
CLK1P49759 RPL17P12-201ENST00000413391 526 ntBASIC3.28□□□□□ -1.88
CLK1P49759 Z85995.1-201ENST00000415547 335 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.28□□□□□ -1.88
CLK1P49759 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.28□□□□□ -1.88
CLK1P49759 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK1P49759 DNAJC19P4-201ENST00000440115 345 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AL022238.1-201ENST00000442557 355 ntBASIC3.28□□□□□ -1.88
CLK1P49759 RPL23AP20-201ENST00000447965 421 ntBASIC3.28□□□□□ -1.88
CLK1P49759 MTCO1P27-201ENST00000448269 226 ntBASIC3.28□□□□□ -1.88
CLK1P49759 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK1P49759 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLK1P49759 AL049874.1-201ENST00000489560 388 ntBASIC3.28□□□□□ -1.88
CLK1P49759 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.28□□□□□ -1.88
CLK1P49759 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.28□□□□□ -1.88
CLK1P49759 RNA5SP216-201ENST00000516111 123 ntBASIC3.28□□□□□ -1.88
CLK1P49759 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AP002748.2-201ENST00000528671 348 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AC245505.1-201ENST00000556398 224 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AC009063.1-201ENST00000563342 702 ntBASIC3.28□□□□□ -1.88
CLK1P49759 MIR5186-201ENST00000577504 120 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
CLK1P49759 AC005771.1-201ENST00000585581 349 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AP001429.1-201ENST00000602568 530 ntBASIC3.28□□□□□ -1.88
CLK1P49759 AC004067.1-201ENST00000608733 700 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms