Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD4P46934 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD4P46934 AP000936.2-201ENST00000447151 681 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 RPL30P9-201ENST00000465586 330 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 AC021382.1-201ENST00000483523 359 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD4P46934 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD4P46934 AC010265.1-201ENST00000513509 211 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 Y_RNA.688-201ENST00000516565 95 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD4P46934 AC012435.1-202ENST00000568772 240 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD4P46934 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD4P46934 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD4P46934 AC007687.1-201ENST00000602704 304 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 WISP1-OT1-201ENST00000602893 642 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 OR2AS2P-201ENST00000606902 342 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 TUG1_1.1-201ENST00000610654 145 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 AL590099.1-201ENST00000615276 138 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NEDD4P46934 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD4P46934 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
NEDD4P46934 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
NEDD4P46934 GABPAP-201ENST00000419271 1356 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NEDD4P46934 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NEDD4P46934 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 Y_RNA.510-201ENST00000384511 114 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 TOMM22P1-201ENST00000418578 312 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AC090960.1-201ENST00000421072 306 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 MED14P1-201ENST00000430517 648 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD4P46934 UBE2V1P13-201ENST00000436983 439 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 RSU1P2-202ENST00000437884 485 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AL512286.1-201ENST00000439244 400 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 OR6K1P-201ENST00000456766 971 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
NEDD4P46934 RN7SL499P-201ENST00000481141 276 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 HMGB1P36-201ENST00000487709 576 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD4P46934 AC106038.2-201ENST00000520706 568 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AC100870.1-201ENST00000522035 505 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD4P46934 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD4P46934 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.13□□□□□ -1.91
NEDD4P46934 MIR3915-201ENST00000578518 97 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 MIR544B-201ENST00000582372 78 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.13□□□□□ -1.91
NEDD4P46934 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD4P46934 AL035413.2-201ENST00000604801 525 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.13□□□□□ -1.91
NEDD4P46934 AC006023.2-201ENST00000609916 167 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AC021755.1-201ENST00000559747 1447 ntBASIC3.13□□□□□ -1.91
NEDD4P46934 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD4P46934 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD4P46934 MTND4P16-201ENST00000466108 1367 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NEDD4P46934 AC006378.2-201ENST00000623178 2476 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 RNU6-501P-201ENST00000364072 100 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 RNU6-1074P-201ENST00000383995 104 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 RNU6-769P-201ENST00000384407 104 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD4P46934 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.12□□□□□ -1.91
NEDD4P46934 AC009518.2-201ENST00000418056 731 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD4P46934 RPS27AP14-201ENST00000422868 454 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 Z83846.1-201ENST00000446798 265 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD4P46934 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD4P46934 SRIP1-201ENST00000489235 288 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD4P46934 AC096751.1-202ENST00000502691 1067 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.12□□□□□ -1.91
NEDD4P46934 AC017037.2-201ENST00000513850 890 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.12□□□□□ -1.91
NEDD4P46934 RNU6-1073P-201ENST00000517182 106 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD4P46934 AC013828.2-201ENST00000532487 235 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.12□□□□□ -1.91
NEDD4P46934 AP000403.1-201ENST00000603349 851 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 BCRP9-201ENST00000605312 388 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD4P46934 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 AC091931.1-201ENST00000623488 728 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 AC092192.1-201ENST00000633154 1018 ntBASIC3.12□□□□□ -1.91
NEDD4P46934 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD4P46934 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.11□□□□□ -1.91
NEDD4P46934 FRG1BP-201ENST00000278882 761 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NEDD4P46934 RNU6-853P-201ENST00000364306 107 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD4P46934 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD4P46934 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD4P46934 CCDC58P2-201ENST00000417131 366 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD4P46934 AC019097.1-201ENST00000424783 735 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 RPL21P66-201ENST00000426566 466 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 SETP8-201ENST00000435341 628 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms