Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
SSR1P43307 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSR1P43307 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
SSR1P43307 AL138955.1-201ENST00000622881 1040 ntBASIC2.71□□□□□ -1.98
SSR1P43307 AC231657.1-201ENST00000624313 397 ntBASIC2.71□□□□□ -1.98
SSR1P43307 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
SSR1P43307 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
SSR1P43307 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.71□□□□□ -1.98
SSR1P43307 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.7□□□□□ -1.98
SSR1P43307 RNU6-289P-201ENST00000364093 107 ntBASIC2.7□□□□□ -1.98
SSR1P43307 RNU6-7-201ENST00000364784 107 ntBASIC2.7□□□□□ -1.98
SSR1P43307 RNU6-8-201ENST00000365467 107 ntBASIC2.7□□□□□ -1.98
SSR1P43307 SNORA36C-201ENST00000384289 132 ntBASIC2.7□□□□□ -1.98
SSR1P43307 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SSR1P43307 RPL23AP29-201ENST00000397284 453 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.7□□□□□ -1.98
SSR1P43307 MTND1P23-201ENST00000416931 372 ntBASIC2.7□□□□□ -1.98
SSR1P43307 COTL1P1-201ENST00000422309 375 ntBASIC2.7□□□□□ -1.98
SSR1P43307 PPP1R11P2-201ENST00000423543 382 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC091390.3-201ENST00000426478 338 ntBASIC2.7□□□□□ -1.98
SSR1P43307 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.7□□□□□ -1.98
SSR1P43307 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AL512844.2-201ENST00000433990 593 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.7□□□□□ -1.98
SSR1P43307 MTND1P31-201ENST00000449206 961 ntBASIC2.7□□□□□ -1.98
SSR1P43307 SNORD109B-201ENST00000458961 67 ntBASIC2.7□□□□□ -1.98
SSR1P43307 SNORD109A-201ENST00000459128 67 ntBASIC2.7□□□□□ -1.98
SSR1P43307 RPL31P50-201ENST00000471002 296 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC096571.1-202ENST00000506634 735 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.7□□□□□ -1.98
SSR1P43307 AC022483.1-201ENST00000514020 567 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.7□□□□□ -1.98
SSR1P43307 RN7SKP132-201ENST00000516001 208 ntBASIC2.7□□□□□ -1.98
SSR1P43307 RNU6-714P-201ENST00000516963 103 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.7□□□□□ -1.98
SSR1P43307 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.7□□□□□ -1.98
SSR1P43307 AC123904.3-201ENST00000547218 814 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AL512347.1-201ENST00000566420 503 ntBASIC2.7□□□□□ -1.98
SSR1P43307 HMGB1P6-201ENST00000569046 646 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC090079.2-201ENST00000575289 768 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SSR1P43307 MIR3200-201ENST00000580767 85 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.7□□□□□ -1.98
SSR1P43307 AC006270.3-201ENST00000605967 1036 ntBASIC2.7□□□□□ -1.98
SSR1P43307 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.7□□□□□ -1.98
SSR1P43307 AC080013.4-201ENST00000607624 649 ntBASIC2.7□□□□□ -1.98
SSR1P43307 OR10AB1P-201ENST00000609613 938 ntBASIC2.7□□□□□ -1.98
SSR1P43307 PART1_2.1-201ENST00000612397 250 ntBASIC2.7□□□□□ -1.98
SSR1P43307 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SSR1P43307 ZNF658B-202ENST00000615961 3375 ntBASIC2.7□□□□□ -1.98
SSR1P43307 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SSR1P43307 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.69□□□□□ -1.98
SSR1P43307 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.69□□□□□ -1.98
SSR1P43307 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSR1P43307 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SSR1P43307 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.69□□□□□ -1.98
SSR1P43307 SNORA3A-201ENST00000364113 130 ntBASIC2.69□□□□□ -1.98
SSR1P43307 RNU4-51P-201ENST00000364206 140 ntBASIC2.69□□□□□ -1.98
SSR1P43307 RNU6-777P-201ENST00000364265 104 ntBASIC2.69□□□□□ -1.98
SSR1P43307 MIR9-1-201ENST00000385198 89 ntBASIC2.69□□□□□ -1.98
SSR1P43307 SNORA11.1-201ENST00000408133 129 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.69□□□□□ -1.98
SSR1P43307 TAAR7P-201ENST00000436141 242 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC009237.8-201ENST00000445492 379 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.69□□□□□ -1.98
SSR1P43307 AL031659.1-201ENST00000447075 539 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.69□□□□□ -1.98
SSR1P43307 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.69□□□□□ -1.98
SSR1P43307 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.69□□□□□ -1.98
SSR1P43307 AC114981.1-201ENST00000503897 678 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC113347.3-201ENST00000509113 148 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.69□□□□□ -1.98
SSR1P43307 AC005832.3-201ENST00000537929 631 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC090615.1-201ENST00000577519 154 ntBASIC2.69□□□□□ -1.98
SSR1P43307 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.69□□□□□ -1.98
SSR1P43307 SNORD14A-201ENST00000606526 91 ntBASIC2.69□□□□□ -1.98
SSR1P43307 AC131235.4-201ENST00000609288 620 ntBASIC2.69□□□□□ -1.98
SSR1P43307 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSR1P43307 AC135507.2-201ENST00000612443 309 ntBASIC2.69□□□□□ -1.98
SSR1P43307 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
SSR1P43307 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
SSR1P43307 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SSR1P43307 AC004944.1-201ENST00000517807 3059 ntBASIC2.69□□□□□ -1.98
SSR1P43307 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.69□□□□□ -1.98
SSR1P43307 MTCO1P9-201ENST00000505577 1534 ntBASIC2.68□□□□□ -1.98
SSR1P43307 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSR1P43307 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.68□□□□□ -1.98
SSR1P43307 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSR1P43307 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSR1P43307 RNU6-859P-201ENST00000362728 107 ntBASIC2.68□□□□□ -1.98
SSR1P43307 AL360182.1-201ENST00000397433 468 ntBASIC2.68□□□□□ -1.98
SSR1P43307 RNU2-52P-201ENST00000410680 190 ntBASIC2.68□□□□□ -1.98
SSR1P43307 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.68□□□□□ -1.98
SSR1P43307 MTCO2P5-201ENST00000422621 426 ntBASIC2.68□□□□□ -1.98
SSR1P43307 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSR1P43307 AC007560.1-201ENST00000426912 237 ntBASIC2.68□□□□□ -1.98
SSR1P43307 MTND2P24-201ENST00000453434 806 ntBASIC2.68□□□□□ -1.98
SSR1P43307 RPL30P5-201ENST00000494923 336 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms