Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC009229.3-201ENST00000608056 282 ntBASIC1.09□□□□□ -2.24
HTTP42858 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
HTTP42858 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HTTP42858 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.08□□□□□ -2.24
HTTP42858 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.08□□□□□ -2.24
HTTP42858 RPL7P27-201ENST00000403775 720 ntBASIC1.08□□□□□ -2.24
HTTP42858 RPL5P19-201ENST00000404228 893 ntBASIC1.08□□□□□ -2.24
HTTP42858 AC109780.2-201ENST00000413467 845 ntBASIC1.08□□□□□ -2.24
HTTP42858 RPL31P63-201ENST00000422565 375 ntBASIC1.08□□□□□ -2.24
HTTP42858 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.08□□□□□ -2.24
HTTP42858 PTGES3P5-201ENST00000455109 434 ntBASIC1.08□□□□□ -2.24
HTTP42858 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.08□□□□□ -2.24
HTTP42858 CYCSP23-201ENST00000519781 313 ntBASIC1.08□□□□□ -2.24
HTTP42858 AC087808.1-201ENST00000520501 361 ntBASIC1.08□□□□□ -2.24
HTTP42858 DPRXP5-201ENST00000604662 539 ntBASIC1.08□□□□□ -2.24
HTTP42858 CENPCP1-201ENST00000533085 2578 ntBASIC1.08□□□□□ -2.24
HTTP42858 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HTTP42858 Y_RNA.280-201ENST00000364765 112 ntBASIC1.08□□□□□ -2.24
HTTP42858 AP000949.1-201ENST00000438328 629 ntBASIC1.08□□□□□ -2.24
HTTP42858 RNA5SP233-201ENST00000459153 113 ntBASIC1.08□□□□□ -2.24
HTTP42858 AC023424.2-201ENST00000493479 777 ntBASIC1.08□□□□□ -2.24
HTTP42858 ANP32BP3-201ENST00000559213 706 ntBASIC1.08□□□□□ -2.24
HTTP42858 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.08□□□□□ -2.24
HTTP42858 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.08□□□□□ -2.24
HTTP42858 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
HTTP42858 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
HTTP42858 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
HTTP42858 Y_RNA.136-201ENST00000363444 102 ntBASIC1.07□□□□□ -2.24
HTTP42858 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.07□□□□□ -2.24
HTTP42858 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.07□□□□□ -2.24
HTTP42858 RPL23AP41-201ENST00000484754 458 ntBASIC1.07□□□□□ -2.24
HTTP42858 MTND4LP22-201ENST00000508209 276 ntBASIC1.07□□□□□ -2.24
HTTP42858 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
HTTP42858 MIR7974-201ENST00000615835 79 ntBASIC1.07□□□□□ -2.24
HTTP42858 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.07□□□□□ -2.24
HTTP42858 MTND2P9-201ENST00000422293 931 ntBASIC1.07□□□□□ -2.24
HTTP42858 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.07□□□□□ -2.24
HTTP42858 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.07□□□□□ -2.24
HTTP42858 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.07□□□□□ -2.24
HTTP42858 RNA5SP309-201ENST00000516670 106 ntBASIC1.07□□□□□ -2.24
HTTP42858 RNA5SP82-201ENST00000516707 92 ntBASIC1.07□□□□□ -2.24
HTTP42858 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.07□□□□□ -2.24
HTTP42858 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.06□□□□□ -2.24
HTTP42858 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.06□□□□□ -2.24
HTTP42858 RPS15AP34-201ENST00000487776 387 ntBASIC1.06□□□□□ -2.24
HTTP42858 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.06□□□□□ -2.24
HTTP42858 RPS26P21-201ENST00000475397 348 ntBASIC1.06□□□□□ -2.24
HTTP42858 AC007115.1-201ENST00000546853 234 ntBASIC1.06□□□□□ -2.24
HTTP42858 AC104229.1-201ENST00000561364 255 ntBASIC1.06□□□□□ -2.24
HTTP42858 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.06□□□□□ -2.24
HTTP42858 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.06□□□□□ -2.24
HTTP42858 AC233728.2-201ENST00000425348 757 ntBASIC1.06□□□□□ -2.24
HTTP42858 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.06□□□□□ -2.24
HTTP42858 AC000111.3-201ENST00000433478 193 ntBASIC1.06□□□□□ -2.24
HTTP42858 RPS15AP7-201ENST00000439294 405 ntBASIC1.06□□□□□ -2.24
HTTP42858 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.06□□□□□ -2.24
HTTP42858 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.06□□□□□ -2.24
HTTP42858 BX322635.1-201ENST00000605804 496 ntBASIC1.06□□□□□ -2.24
HTTP42858 AC011330.2-201ENST00000621680 635 ntBASIC1.06□□□□□ -2.24
HTTP42858 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.06□□□□□ -2.24
HTTP42858 RNA5SP393-201ENST00000363423 117 ntBASIC1.05□□□□□ -2.24
HTTP42858 RNU2-22P-201ENST00000411266 212 ntBASIC1.05□□□□□ -2.24
HTTP42858 CST2P1-201ENST00000425770 87 ntBASIC1.05□□□□□ -2.24
HTTP42858 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.05□□□□□ -2.24
HTTP42858 ACTR3BP3-201ENST00000565577 979 ntBASIC1.05□□□□□ -2.24
HTTP42858 AC006270.3-201ENST00000605967 1036 ntBASIC1.05□□□□□ -2.24
HTTP42858 SNHG22-203ENST00000617833 660 ntBASIC1.05□□□□□ -2.24
HTTP42858 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.05□□□□□ -2.24
HTTP42858 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.05□□□□□ -2.24
HTTP42858 AP003497.1-201ENST00000528472 562 ntBASIC1.05□□□□□ -2.24
HTTP42858 APOOP3-201ENST00000536787 586 ntBASIC1.05□□□□□ -2.24
HTTP42858 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.05□□□□□ -2.24
HTTP42858 AC012443.1-201ENST00000605605 231 ntBASIC1.05□□□□□ -2.24
HTTP42858 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.05□□□□□ -2.24
HTTP42858 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.04□□□□□ -2.24
HTTP42858 NUP35P2-201ENST00000416748 943 ntBASIC1.04□□□□□ -2.24
HTTP42858 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.04□□□□□ -2.24
HTTP42858 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.04□□□□□ -2.24
HTTP42858 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.04□□□□□ -2.24
HTTP42858 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.04□□□□□ -2.24
HTTP42858 AC010200.2-201ENST00000605098 235 ntBASIC1.04□□□□□ -2.24
HTTP42858 AC008962.1-201ENST00000605729 304 ntBASIC1.04□□□□□ -2.24
HTTP42858 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.04□□□□□ -2.24
HTTP42858 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.04□□□□□ -2.24
HTTP42858 Y_RNA.412-201ENST00000384001 104 ntBASIC1.04□□□□□ -2.24
HTTP42858 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.04□□□□□ -2.24
HTTP42858 OR6K5P-201ENST00000447050 945 ntBASIC1.04□□□□□ -2.24
HTTP42858 AC104806.1-201ENST00000508720 308 ntBASIC1.04□□□□□ -2.24
HTTP42858 MIR4723-201ENST00000585070 81 ntBASIC1.04□□□□□ -2.24
HTTP42858 ZNF965P-201ENST00000432501 817 ntBASIC1.04□□□□□ -2.24
HTTP42858 AC016691.1-201ENST00000441321 413 ntBASIC1.04□□□□□ -2.24
HTTP42858 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.04□□□□□ -2.24
HTTP42858 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.04□□□□□ -2.24
HTTP42858 AC126177.8-201ENST00000618339 1015 ntBASIC1.04□□□□□ -2.24
HTTP42858 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
HTTP42858 AC019070.1-201ENST00000415008 1024 ntBASIC1.03□□□□□ -2.24
HTTP42858 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.03□□□□□ -2.24
HTTP42858 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.03□□□□□ -2.24
HTTP42858 OR5AQ1P-201ENST00000527596 927 ntBASIC1.03□□□□□ -2.24
HTTP42858 MIR4446-201ENST00000578505 67 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms