Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR7975-201ENST00000619350 68 ntBASIC3.44□□□□□ -1.86
HADHAP40939 U6.105-201ENST00000637379 88 ntBASIC3.44□□□□□ -1.86
HADHAP40939 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
HADHAP40939 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.44□□□□□ -1.86
HADHAP40939 AL049641.1-201ENST00000441055 1948 ntBASIC3.44□□□□□ -1.86
HADHAP40939 MTCO1P12-201ENST00000414273 1543 ntBASIC3.44□□□□□ -1.86
HADHAP40939 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HADHAP40939 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HADHAP40939 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
HADHAP40939 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
HADHAP40939 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HADHAP40939 RNU1-39P-201ENST00000383897 165 ntBASIC3.43□□□□□ -1.86
HADHAP40939 MRPL42P2-201ENST00000403169 426 ntBASIC3.43□□□□□ -1.86
HADHAP40939 RNU2-8P-201ENST00000410727 190 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC126124.2-201ENST00000413542 321 ntBASIC3.43□□□□□ -1.86
HADHAP40939 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.43□□□□□ -1.86
HADHAP40939 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 RPL7P46-201ENST00000425129 740 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AL356583.2-201ENST00000426536 280 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC137499.1-201ENST00000427602 88 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC092573.2-201ENST00000434546 243 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 AC129850.1-201ENST00000436203 508 ntBASIC3.43□□□□□ -1.86
HADHAP40939 Z82210.1-201ENST00000440037 231 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.43□□□□□ -1.86
HADHAP40939 SNORD97-201ENST00000459187 142 ntBASIC3.43□□□□□ -1.86
HADHAP40939 MTCO2P29-201ENST00000465212 189 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC104472.2-201ENST00000469035 601 ntBASIC3.43□□□□□ -1.86
HADHAP40939 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.43□□□□□ -1.86
HADHAP40939 AC006445.2-201ENST00000510061 472 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AP003467.2-201ENST00000520175 319 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC011979.2-201ENST00000527568 352 ntBASIC3.43□□□□□ -1.86
HADHAP40939 DNAJC8P1-201ENST00000554535 372 ntBASIC3.43□□□□□ -1.86
HADHAP40939 TRAV28-201ENST00000557548 323 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.43□□□□□ -1.86
HADHAP40939 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.43□□□□□ -1.86
HADHAP40939 MIR4293-201ENST00000584305 78 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.43□□□□□ -1.86
HADHAP40939 AC079089.3-201ENST00000603094 673 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AL161729.4-201ENST00000604650 476 ntBASIC3.43□□□□□ -1.86
HADHAP40939 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HADHAP40939 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
HADHAP40939 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
HADHAP40939 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HADHAP40939 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
HADHAP40939 RNA5SP387-201ENST00000364226 106 ntBASIC3.42□□□□□ -1.86
HADHAP40939 Y_RNA.333-201ENST00000365274 102 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HADHAP40939 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HADHAP40939 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.42□□□□□ -1.86
HADHAP40939 RPS7P13-201ENST00000413955 498 ntBASIC3.42□□□□□ -1.86
HADHAP40939 Z85995.1-201ENST00000415547 335 ntBASIC3.42□□□□□ -1.86
HADHAP40939 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.42□□□□□ -1.86
HADHAP40939 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC009518.2-201ENST00000418056 731 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC245291.1-201ENST00000419501 328 ntBASIC3.42□□□□□ -1.86
HADHAP40939 RPL23AP69-201ENST00000431134 458 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.42□□□□□ -1.86
HADHAP40939 AL159987.2-201ENST00000432754 307 ntBASIC3.42□□□□□ -1.86
HADHAP40939 RPL23AP83-201ENST00000434984 473 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC009961.3-201ENST00000449832 765 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC087588.1-201ENST00000462203 316 ntBASIC3.42□□□□□ -1.86
HADHAP40939 RN7SL442P-201ENST00000473804 320 ntBASIC3.42□□□□□ -1.86
HADHAP40939 MTND5P13-201ENST00000513046 1079 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.42□□□□□ -1.86
HADHAP40939 RN7SKP258-201ENST00000517151 304 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AP002748.2-201ENST00000528671 348 ntBASIC3.42□□□□□ -1.86
HADHAP40939 HIGD1AP1-201ENST00000550979 275 ntBASIC3.42□□□□□ -1.86
HADHAP40939 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HADHAP40939 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.42□□□□□ -1.86
HADHAP40939 AC005951.1-201ENST00000576706 485 ntBASIC3.42□□□□□ -1.86
HADHAP40939 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.42□□□□□ -1.86
HADHAP40939 AC068057.2-201ENST00000624047 895 ntBASIC3.42□□□□□ -1.86
HADHAP40939 OR5H6-203ENST00000642105 978 ntBASIC3.42□□□□□ -1.86
HADHAP40939 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HADHAP40939 AL137003.2-201ENST00000606924 2538 ntBASIC3.42□□□□□ -1.86
HADHAP40939 MTND5P1-201ENST00000445440 1375 ntBASIC3.41□□□□□ -1.86
HADHAP40939 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HADHAP40939 FGF7P2-201ENST00000332473 296 ntBASIC3.41□□□□□ -1.86
HADHAP40939 RNA5SP50-201ENST00000363731 107 ntBASIC3.41□□□□□ -1.86
HADHAP40939 RNY3P13-201ENST00000365542 102 ntBASIC3.41□□□□□ -1.86
HADHAP40939 AL021407.1-201ENST00000404531 386 ntBASIC3.41□□□□□ -1.86
HADHAP40939 RNU2-33P-201ENST00000410344 192 ntBASIC3.41□□□□□ -1.86
HADHAP40939 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.41□□□□□ -1.86
HADHAP40939 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
HADHAP40939 ZNF90P2-204ENST00000419323 1075 ntBASIC3.41□□□□□ -1.86
HADHAP40939 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.41□□□□□ -1.86
HADHAP40939 AC019097.1-201ENST00000424783 735 ntBASIC3.41□□□□□ -1.86
HADHAP40939 RPS27AP8-201ENST00000452665 445 ntBASIC3.41□□□□□ -1.86
HADHAP40939 SSXP1-201ENST00000453640 473 ntBASIC3.41□□□□□ -1.86
HADHAP40939 TTC39CP1-201ENST00000512513 755 ntBASIC3.41□□□□□ -1.86
HADHAP40939 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.41□□□□□ -1.86
HADHAP40939 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.41□□□□□ -1.86
HADHAP40939 AC107934.1-201ENST00000522215 217 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms