Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SNORA51.11-201ENST00000384442 131 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AL133264.1-201ENST00000407157 562 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC069282.1-201ENST00000411911 526 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 BTF3P8-201ENST00000414577 526 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RPS15AP12-201ENST00000419498 388 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 FNDC3CP-201ENST00000420795 1155 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC114973.1-201ENST00000429057 632 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 EZH2P1-201ENST00000431167 291 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 PTGES3P1-201ENST00000439531 483 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC093155.1-201ENST00000440164 826 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC087879.1-201ENST00000474343 374 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 HMGB3P15-201ENST00000507326 574 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 FAM92A1P1-201ENST00000528023 890 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC118942.1-201ENST00000529674 1035 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC139103.1-201ENST00000534696 1030 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN4AP35499 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC093519.1-201ENST00000566109 298 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 SNORD39.3-201ENST00000584451 71 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 YWHAQP7-201ENST00000603536 658 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RPP40P2-201ENST00000603596 712 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC113368.1-201ENST00000603736 382 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC099785.1-201ENST00000605697 437 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SCN4AP35499 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN4AP35499 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN4AP35499 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN4AP35499 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN4AP35499 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SCN4AP35499 RNU6-492P-201ENST00000363035 104 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RNU6-444P-201ENST00000383988 108 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RNU6-441P-201ENST00000384545 106 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 MIR217-201ENST00000384817 110 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 MCTS2P-201ENST00000394552 546 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 MIR1276-201ENST00000408707 83 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 RNU2-47P-201ENST00000410649 186 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC004022.2-201ENST00000413824 193 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RPL23AP39-201ENST00000415533 405 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.31□□□□□ -2.04
SCN4AP35499 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.31□□□□□ -2.04
SCN4AP35499 MTCYBP42-201ENST00000444653 1130 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 CBWD4P-201ENST00000445695 655 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC007182.2-201ENST00000489251 402 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 MTCYBP37-201ENST00000510642 1133 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC109471.1-201ENST00000511631 612 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 MTCO2P32-201ENST00000514865 403 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC122134.1-202ENST00000569111 1201 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.31□□□□□ -2.04
SCN4AP35499 AP001542.2-201ENST00000593141 364 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC091946.2-201ENST00000606105 291 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AL592148.2-201ENST00000612210 372 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN4AP35499 AC010608.3-201ENST00000625048 527 ntBASIC2.31□□□□□ -2.04
SCN4AP35499 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCN4AP35499 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCN4AP35499 RNU5B-1-201ENST00000363286 116 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 snoZ40.1-201ENST00000364540 72 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AL136372.1-201ENST00000403060 228 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 RNU2-68P-201ENST00000410878 191 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 MTCYBP32-201ENST00000427945 1084 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 USP9YP34-201ENST00000453983 808 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 RNU7-95P-201ENST00000459222 64 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN4AP35499 RPS29P11-201ENST00000496507 171 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 TTC39CP1-201ENST00000512513 755 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN4AP35499 Y_RNA.670-201ENST00000516255 105 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.3□□□□□ -2.04
SCN4AP35499 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 OR5AK1P-201ENST00000524837 922 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AL035411.2-201ENST00000604022 421 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 AC002487.1-201ENST00000604565 994 ntBASIC2.3□□□□□ -2.04
SCN4AP35499 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN4AP35499 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.29□□□□□ -2.04
SCN4AP35499 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SCN4AP35499 AC103988.1-201ENST00000566382 2177 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 RNU6-263P-201ENST00000363811 107 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms