Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC072039.1-201ENST00000477611 581 ntBASIC3.49□□□□□ -1.85
BDNFP23560 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 MRPS36P2-201ENST00000512569 299 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC022447.1-201ENST00000515358 464 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.49□□□□□ -1.85
BDNFP23560 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.49□□□□□ -1.85
BDNFP23560 COX6CP5-201ENST00000527162 228 ntBASIC3.49□□□□□ -1.85
BDNFP23560 RPL21P12-201ENST00000559810 515 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AGGF1P5-201ENST00000567900 919 ntBASIC3.49□□□□□ -1.85
BDNFP23560 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 MIR4307-201ENST00000582802 84 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.49□□□□□ -1.85
BDNFP23560 AC013244.3-201ENST00000605614 388 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC131902.3-201ENST00000611767 581 ntBASIC3.49□□□□□ -1.85
BDNFP23560 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.49□□□□□ -1.85
BDNFP23560 AC110491.1-201ENST00000562191 2010 ntBASIC3.49□□□□□ -1.85
BDNFP23560 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
BDNFP23560 AC017071.1-201ENST00000564407 2204 ntBASIC3.48□□□□□ -1.85
BDNFP23560 MTND5P27-201ENST00000428871 1720 ntBASIC3.48□□□□□ -1.85
BDNFP23560 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
BDNFP23560 RPL21P75-201ENST00000396599 483 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC119751.3-201ENST00000399720 670 ntBASIC3.48□□□□□ -1.85
BDNFP23560 RPL21P28-201ENST00000401418 483 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL592114.1-201ENST00000403842 483 ntBASIC3.48□□□□□ -1.85
BDNFP23560 ZNF90P2-204ENST00000419323 1075 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC098592.1-201ENST00000419352 333 ntBASIC3.48□□□□□ -1.85
BDNFP23560 MTND1P20-201ENST00000430341 950 ntBASIC3.48□□□□□ -1.85
BDNFP23560 GPM6BP2-201ENST00000432046 144 ntBASIC3.48□□□□□ -1.85
BDNFP23560 MTND1P28-201ENST00000435623 950 ntBASIC3.48□□□□□ -1.85
BDNFP23560 ATP5C1P1-201ENST00000441945 895 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC009296.1-201ENST00000443146 155 ntBASIC3.48□□□□□ -1.85
BDNFP23560 GPM6BP1-201ENST00000446387 144 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.48□□□□□ -1.85
BDNFP23560 RPL21P39-201ENST00000463605 483 ntBASIC3.48□□□□□ -1.85
BDNFP23560 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
BDNFP23560 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.48□□□□□ -1.85
BDNFP23560 RPL21P93-201ENST00000480465 489 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC087190.1-201ENST00000484462 480 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC093591.1-201ENST00000491435 481 ntBASIC3.48□□□□□ -1.85
BDNFP23560 RPL21P16-201ENST00000495531 483 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC020893.1-201ENST00000502452 580 ntBASIC3.48□□□□□ -1.85
BDNFP23560 RN7SKP57-201ENST00000517248 293 ntBASIC3.48□□□□□ -1.85
BDNFP23560 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.48□□□□□ -1.85
BDNFP23560 MIR3200-201ENST00000580767 85 ntBASIC3.48□□□□□ -1.85
BDNFP23560 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.6-201ENST00000603753 252 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.11-201ENST00000604059 253 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC008162.1-201ENST00000604718 254 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.1-201ENST00000604752 252 ntBASIC3.48□□□□□ -1.85
BDNFP23560 MTND4LP5-201ENST00000605152 292 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.5-201ENST00000605253 252 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.12-201ENST00000605291 253 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.8-201ENST00000605353 252 ntBASIC3.48□□□□□ -1.85
BDNFP23560 YPEL5P2-201ENST00000605553 359 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AL670379.7-201ENST00000605823 252 ntBASIC3.48□□□□□ -1.85
BDNFP23560 RMST_8.1-201ENST00000610287 165 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC013562.2-201ENST00000611632 603 ntBASIC3.48□□□□□ -1.85
BDNFP23560 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.48□□□□□ -1.85
BDNFP23560 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
BDNFP23560 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
BDNFP23560 MTND4P16-201ENST00000466108 1367 ntBASIC3.48□□□□□ -1.85
BDNFP23560 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BDNFP23560 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
BDNFP23560 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BDNFP23560 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
BDNFP23560 AL391994.1-201ENST00000254724 282 ntBASIC3.47□□□□□ -1.85
BDNFP23560 RN7SKP226-201ENST00000364912 300 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AL122016.1-201ENST00000403365 367 ntBASIC3.47□□□□□ -1.85
BDNFP23560 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.47□□□□□ -1.85
BDNFP23560 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.47□□□□□ -1.85
BDNFP23560 RPS27AP14-201ENST00000422868 454 ntBASIC3.47□□□□□ -1.85
BDNFP23560 MTCYBP39-201ENST00000437562 491 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC006028.1-201ENST00000438379 402 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC098831.1-201ENST00000440661 216 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.47□□□□□ -1.85
BDNFP23560 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.47□□□□□ -1.85
BDNFP23560 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.47□□□□□ -1.85
BDNFP23560 AL590639.1-201ENST00000456484 337 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.47□□□□□ -1.85
BDNFP23560 RPS15AP34-201ENST00000487776 387 ntBASIC3.47□□□□□ -1.85
BDNFP23560 RN7SL504P-201ENST00000494496 287 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC110794.1-201ENST00000505816 425 ntBASIC3.47□□□□□ -1.85
BDNFP23560 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
BDNFP23560 RN7SKP40-201ENST00000517211 242 ntBASIC3.47□□□□□ -1.85
BDNFP23560 HSPE1P20-201ENST00000538133 289 ntBASIC3.47□□□□□ -1.85
BDNFP23560 ELOCP32-201ENST00000548625 324 ntBASIC3.47□□□□□ -1.85
BDNFP23560 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.47□□□□□ -1.85
BDNFP23560 AL157394.1-201ENST00000562983 1224 ntBASIC3.47□□□□□ -1.85
BDNFP23560 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC011471.1-201ENST00000585766 187 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC022022.2-201ENST00000602989 360 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AC073657.2-201ENST00000605661 303 ntBASIC3.47□□□□□ -1.85
BDNFP23560 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BDNFP23560 AC021755.4-201ENST00000616620 456 ntBASIC3.47□□□□□ -1.85
BDNFP23560 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.47□□□□□ -1.85
BDNFP23560 AC007998.5-201ENST00000622938 237 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms