Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORD114-21-201ENST00000606412 72 ntBASIC1.8□□□□□ -2.12
TOP2AP11388 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.8□□□□□ -2.12
TOP2AP11388 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TOP2AP11388 AC080100.1-201ENST00000624239 5356 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TOP2AP11388 Y_RNA.36-201ENST00000362602 112 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 OR1L1-202ENST00000373686 1083 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 SNORA46.1-201ENST00000391069 153 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 RPL5P19-201ENST00000404228 893 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 AP000949.1-201ENST00000438328 629 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.79□□□□□ -2.12
TOP2AP11388 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.79□□□□□ -2.12
TOP2AP11388 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.79□□□□□ -2.12
TOP2AP11388 RNU6-405P-201ENST00000516637 110 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 RNU6-467P-201ENST00000517027 110 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 CASP1P1-201ENST00000526345 212 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 MIR3973-201ENST00000579824 107 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 DPRXP5-201ENST00000604662 539 ntBASIC1.79□□□□□ -2.12
TOP2AP11388 RNU1-139P-201ENST00000391307 165 ntBASIC1.78□□□□□ -2.12
TOP2AP11388 AL023807.1-201ENST00000407932 359 ntBASIC1.78□□□□□ -2.12
TOP2AP11388 AL360221.1-201ENST00000445989 335 ntBASIC1.78□□□□□ -2.12
TOP2AP11388 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.78□□□□□ -2.12
TOP2AP11388 AC245884.12-201ENST00000615364 59 ntBASIC1.78□□□□□ -2.12
TOP2AP11388 AL162373.1-201ENST00000620433 407 ntBASIC1.78□□□□□ -2.12
TOP2AP11388 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TOP2AP11388 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TOP2AP11388 AC121333.1-201ENST00000567488 2709 ntBASIC1.78□□□□□ -2.13
TOP2AP11388 RNU1-62P-201ENST00000362599 164 ntBASIC1.77□□□□□ -2.13
TOP2AP11388 HMGB1P49-201ENST00000418882 569 ntBASIC1.77□□□□□ -2.13
TOP2AP11388 GDI2P2-201ENST00000445131 608 ntBASIC1.77□□□□□ -2.13
TOP2AP11388 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.77□□□□□ -2.13
TOP2AP11388 AL139109.1-201ENST00000455491 297 ntBASIC1.77□□□□□ -2.13
TOP2AP11388 PABPC1P3-201ENST00000469174 459 ntBASIC1.77□□□□□ -2.13
TOP2AP11388 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.77□□□□□ -2.13
TOP2AP11388 AC011330.2-201ENST00000621680 635 ntBASIC1.77□□□□□ -2.13
TOP2AP11388 MIR627-201ENST00000384979 97 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 HMGN2P30-201ENST00000423237 256 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.76□□□□□ -2.13
TOP2AP11388 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.76□□□□□ -2.13
TOP2AP11388 RNA5SP233-201ENST00000459153 113 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TOP2AP11388 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AC020658.4-201ENST00000613987 684 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AC008083.4-201ENST00000615076 444 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.76□□□□□ -2.13
TOP2AP11388 AC096632.1-201ENST00000427395 310 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 HMGB3P10-201ENST00000434734 572 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.76□□□□□ -2.13
TOP2AP11388 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.76□□□□□ -2.13
TOP2AP11388 AC234775.1-201ENST00000454247 670 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.76□□□□□ -2.13
TOP2AP11388 AC093767.1-201ENST00000504523 156 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 RNA5SP436-201ENST00000516020 115 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 NDUFS5P6-201ENST00000529136 295 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AP001180.3-201ENST00000582221 145 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 SNORD84-203ENST00000584275 78 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 AC091932.3-201ENST00000624223 323 ntBASIC1.76□□□□□ -2.13
TOP2AP11388 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TOP2AP11388 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.75□□□□□ -2.13
TOP2AP11388 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TOP2AP11388 POLR2J4-204ENST00000418424 324 ntBASIC1.75□□□□□ -2.13
TOP2AP11388 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.75□□□□□ -2.13
TOP2AP11388 snoU109.4-201ENST00000458953 143 ntBASIC1.75□□□□□ -2.13
TOP2AP11388 SNORD56-201ENST00000413522 71 ntBASIC1.74□□□□□ -2.13
TOP2AP11388 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.74□□□□□ -2.13
TOP2AP11388 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.74□□□□□ -2.13
TOP2AP11388 MTND4LP16-201ENST00000440828 295 ntBASIC1.74□□□□□ -2.13
TOP2AP11388 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 RNA5SP498-201ENST00000411342 120 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.73□□□□□ -2.13
TOP2AP11388 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.73□□□□□ -2.13
TOP2AP11388 PSPHP1-201ENST00000450062 261 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.73□□□□□ -2.13
TOP2AP11388 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.73□□□□□ -2.13
TOP2AP11388 AC011712.1-201ENST00000588959 234 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 AL391646.1-201ENST00000603860 190 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 AC012640.5-201ENST00000623897 319 ntBASIC1.73□□□□□ -2.13
TOP2AP11388 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TOP2AP11388 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TOP2AP11388 RNU6-799P-201ENST00000363567 107 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 Y_RNA.205-201ENST00000364128 113 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 AL356379.1-201ENST00000414105 126 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TOP2AP11388 GPM6BP3-201ENST00000442797 145 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 AL035407.2-201ENST00000454090 378 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.72□□□□□ -2.13
TOP2AP11388 CYP3A137P-201ENST00000562436 69 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 AC092140.2-201ENST00000618027 521 ntBASIC1.72□□□□□ -2.13
TOP2AP11388 PRELID3BP11-201ENST00000414230 479 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 ARL5AP3-201ENST00000439327 386 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 OR6K5P-201ENST00000447050 945 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 AL627224.1-201ENST00000448334 444 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.71□□□□□ -2.14
TOP2AP11388 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.71□□□□□ -2.14
TOP2AP11388 AL050343.2-201ENST00000607338 280 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.71□□□□□ -2.14
TOP2AP11388 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms