Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL096701.2-201ENST00000416920 238 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC009963.1-201ENST00000417265 157 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC092047.1-201ENST00000424997 240 ntBASIC2.02□□□□□ -2.09
CD28P10747 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AL590383.1-201ENST00000428602 75 ntBASIC2.02□□□□□ -2.09
CD28P10747 ZYG11AP1-201ENST00000430329 837 ntBASIC2.02□□□□□ -2.09
CD28P10747 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.02□□□□□ -2.09
CD28P10747 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AC104563.1-201ENST00000476147 376 ntBASIC2.02□□□□□ -2.09
CD28P10747 RN7SL297P-201ENST00000483161 293 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC134050.1-201ENST00000495088 933 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AC009901.1-201ENST00000506703 541 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AC021451.1-201ENST00000523498 1129 ntBASIC2.02□□□□□ -2.09
CD28P10747 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.02□□□□□ -2.09
CD28P10747 AL133271.1-201ENST00000538229 291 ntBASIC2.02□□□□□ -2.09
CD28P10747 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.02□□□□□ -2.09
CD28P10747 AC128657.1-201ENST00000549459 145 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.02□□□□□ -2.09
CD28P10747 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.02□□□□□ -2.09
CD28P10747 BBIP1P1-201ENST00000602999 279 ntBASIC2.02□□□□□ -2.09
CD28P10747 MTND3P19-201ENST00000603825 345 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC136601.2-201ENST00000604356 474 ntBASIC2.02□□□□□ -2.09
CD28P10747 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.02□□□□□ -2.09
CD28P10747 AC245297.2-201ENST00000610119 565 ntBASIC2.02□□□□□ -2.09
CD28P10747 AL159972.1-201ENST00000625150 448 ntBASIC2.02□□□□□ -2.09
CD28P10747 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.02□□□□□ -2.09
CD28P10747 OR5H6-203ENST00000642105 978 ntBASIC2.02□□□□□ -2.09
CD28P10747 ELF2P3-201ENST00000445099 1506 ntBASIC2.01□□□□□ -2.09
CD28P10747 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CD28P10747 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
CD28P10747 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CD28P10747 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CD28P10747 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CD28P10747 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 VTRNA1-1-201ENST00000363120 99 ntBASIC2.01□□□□□ -2.09
CD28P10747 RNU4-92P-201ENST00000363783 136 ntBASIC2.01□□□□□ -2.09
CD28P10747 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CD28P10747 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 RNU6-198P-201ENST00000384258 104 ntBASIC2.01□□□□□ -2.09
CD28P10747 RNU6-1207P-201ENST00000384343 107 ntBASIC2.01□□□□□ -2.09
CD28P10747 MIR592-201ENST00000384959 97 ntBASIC2.01□□□□□ -2.09
CD28P10747 RNU6-754P-201ENST00000391166 107 ntBASIC2.01□□□□□ -2.09
CD28P10747 MIR1261-201ENST00000408659 82 ntBASIC2.01□□□□□ -2.09
CD28P10747 MTND1P21-201ENST00000412991 285 ntBASIC2.01□□□□□ -2.09
CD28P10747 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.01□□□□□ -2.09
CD28P10747 USP9YP20-201ENST00000419224 558 ntBASIC2.01□□□□□ -2.09
CD28P10747 BX119904.4-201ENST00000424402 301 ntBASIC2.01□□□□□ -2.09
CD28P10747 OR4K11P-201ENST00000431829 904 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.01□□□□□ -2.09
CD28P10747 BNIP3P2-201ENST00000441221 577 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.01□□□□□ -2.09
CD28P10747 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.01□□□□□ -2.09
CD28P10747 RPL23AP20-201ENST00000447965 421 ntBASIC2.01□□□□□ -2.09
CD28P10747 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.01□□□□□ -2.09
CD28P10747 AC128713.1-201ENST00000471495 306 ntBASIC2.01□□□□□ -2.09
CD28P10747 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.01□□□□□ -2.09
CD28P10747 SEM1P1-201ENST00000506694 209 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC024589.1-201ENST00000512207 263 ntBASIC2.01□□□□□ -2.09
CD28P10747 RNA5SP320-201ENST00000516263 124 ntBASIC2.01□□□□□ -2.09
CD28P10747 RNU6-1256P-201ENST00000516539 103 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC100870.1-201ENST00000522035 505 ntBASIC2.01□□□□□ -2.09
CD28P10747 AP000857.1-201ENST00000532151 543 ntBASIC2.01□□□□□ -2.09
CD28P10747 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 AC009712.1-201ENST00000564938 316 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.01□□□□□ -2.09
CD28P10747 AC020895.1-201ENST00000595362 272 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC079089.3-201ENST00000603094 673 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC007621.1-201ENST00000604544 437 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC019159.1-201ENST00000605094 187 ntBASIC2.01□□□□□ -2.09
CD28P10747 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 AC131235.4-201ENST00000609288 620 ntBASIC2.01□□□□□ -2.09
CD28P10747 AL590808.1-201ENST00000618696 141 ntBASIC2.01□□□□□ -2.09
CD28P10747 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 AC009269.6-201ENST00000621778 588 ntBASIC2.01□□□□□ -2.09
CD28P10747 AC008443.7-201ENST00000622195 246 ntBASIC2.01□□□□□ -2.09
CD28P10747 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 AC110079.1-202ENST00000635213 138 ntBASIC2.01□□□□□ -2.09
CD28P10747 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CD28P10747 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.01□□□□□ -2.09
CD28P10747 OR4G2P-202ENST00000641004 1759 ntBASIC2□□□□□ -2.09
CD28P10747 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2□□□□□ -2.09
CD28P10747 AC138915.1-201ENST00000565427 1685 ntBASIC2□□□□□ -2.09
CD28P10747 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2□□□□□ -2.09
CD28P10747 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CD28P10747 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CD28P10747 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CD28P10747 RNU6-1078P-201ENST00000364522 103 ntBASIC2□□□□□ -2.09
CD28P10747 RNU6-637P-201ENST00000384050 107 ntBASIC2□□□□□ -2.09
CD28P10747 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2□□□□□ -2.09
CD28P10747 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 ATP5F1P1-201ENST00000433775 569 ntBASIC2□□□□□ -2.09
CD28P10747 AL512844.2-201ENST00000433990 593 ntBASIC2□□□□□ -2.09
CD28P10747 RPL36AP6-201ENST00000435770 321 ntBASIC2□□□□□ -2.09
CD28P10747 AC129850.1-201ENST00000436203 508 ntBASIC2□□□□□ -2.09
CD28P10747 COX7BP2-201ENST00000437976 242 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms