Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC6P09630 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC6P09630 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC6P09630 DUXAP4-201ENST00000603046 613 ntBASIC3.69□□□□□ -1.82
HOXC6P09630 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXC6P09630 AC092794.2-201ENST00000620933 563 ntBASIC3.69□□□□□ -1.82
HOXC6P09630 C2orf27A-204ENST00000623058 969 ntBASIC3.69□□□□□ -1.82
HOXC6P09630 CYP3A51P-201ENST00000633513 256 ntBASIC3.69□□□□□ -1.82
HOXC6P09630 MIR622-201ENST00000638396 96 ntBASIC3.69□□□□□ -1.82
HOXC6P09630 AC099654.14-201ENST00000638599 341 ntBASIC3.69□□□□□ -1.82
HOXC6P09630 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC6P09630 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HOXC6P09630 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXC6P09630 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 Y_RNA.70-201ENST00000362886 110 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 RNU6-282P-201ENST00000365357 103 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 RPL7P25-201ENST00000404151 721 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AL024474.1-201ENST00000404655 591 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 MTCO2P19-201ENST00000427513 598 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC008065.1-201ENST00000428525 348 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AL590233.1-201ENST00000430017 456 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXC6P09630 AC000111.3-201ENST00000433478 193 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AL121601.2-201ENST00000438019 707 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC6P09630 C1DP4-201ENST00000455429 424 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 PABPC1P3-201ENST00000469174 459 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC098799.2-201ENST00000509466 868 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC6P09630 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC6P09630 AC093677.1-201ENST00000514414 678 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC008885.1-201ENST00000514930 301 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC104057.1-201ENST00000515547 497 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 Y_RNA.672-201ENST00000516289 104 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 RNU6-714P-201ENST00000516963 103 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC107934.2-201ENST00000518653 310 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC6P09630 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXC6P09630 IGHV3-29-201ENST00000604817 344 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC055876.5-201ENST00000605667 259 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC113194.1-201ENST00000606037 500 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 RNU6-87P-201ENST00000607561 108 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXC6P09630 AC004009.2-201ENST00000623016 728 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXC6P09630 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC6P09630 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXC6P09630 MTND5P28-201ENST00000438005 1594 ntBASIC3.68□□□□□ -1.82
HOXC6P09630 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC6P09630 AC092125.1-201ENST00000562568 1995 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 ELL2P4-201ENST00000446870 1376 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC6P09630 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC6P09630 RNY4P14-201ENST00000363656 96 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HOXC6P09630 UBE2V1P2-201ENST00000397758 440 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC126124.2-201ENST00000413542 321 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 MTATP6P27-201ENST00000416987 621 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 RPL31P45-201ENST00000419532 356 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 PIGFP2-201ENST00000421400 651 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 PSMA6P3-201ENST00000428242 164 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC025750.2-201ENST00000442609 450 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 RPS20P32-201ENST00000456044 356 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 AC068305.1-201ENST00000497406 726 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 AC093767.1-201ENST00000504523 156 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC105914.1-201ENST00000511798 226 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 MIR2114-201ENST00000516645 80 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC022616.6-201ENST00000520479 119 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AP001893.2-201ENST00000526949 202 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC118273.2-201ENST00000532092 465 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 MIR3682-201ENST00000581338 84 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC6P09630 AL359999.1-201ENST00000604513 294 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC080013.4-201ENST00000607624 649 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC104458.1-201ENST00000608243 463 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AL590282.1-201ENST00000610379 1136 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC6P09630 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC002553.4-201ENST00000616896 331 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 AC005609.4-201ENST00000625071 447 ntBASIC3.67□□□□□ -1.82
HOXC6P09630 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC6P09630 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC6P09630 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms