Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC079395.3-201ENST00000615161 484 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC011330.2-201ENST00000621680 635 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC010872.1-201ENST00000624225 675 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AC080188.3-201ENST00000624842 748 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 OR5H6-203ENST00000642105 978 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 AL137003.2-201ENST00000606924 2538 ntBASIC1.93□□□□□ -2.1
HLA-DQB2P05538 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB2P05538 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AL596028.1-201ENST00000326971 197 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 OR56A5-201ENST00000340110 738 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 SNORD114-1-201ENST00000362705 72 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 RNU6-353P-201ENST00000364266 108 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 RN7SKP226-201ENST00000364912 300 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 RNU1-52P-201ENST00000384190 164 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 MIR767-201ENST00000390228 109 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 RNU6-932P-201ENST00000391108 106 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 UBE2V1P15-201ENST00000407776 448 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 Z75741.2-201ENST00000417272 1167 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AL358075.3-201ENST00000426289 226 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 OR4K11P-201ENST00000431829 904 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AL445687.1-201ENST00000439946 251 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC003989.2-201ENST00000440224 169 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 FABP5P13-201ENST00000452144 328 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 USP9YP34-201ENST00000453983 808 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC092155.2-201ENST00000454675 477 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC233279.1-201ENST00000455300 423 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AL139109.1-201ENST00000455491 297 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 FAM172BP-201ENST00000487497 1089 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC007182.2-201ENST00000489251 402 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 EIF4EP3-201ENST00000498782 656 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 MTCYBP17-201ENST00000503579 789 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 COX7A2P2-201ENST00000505291 250 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC010468.3-201ENST00000508225 458 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 RNU6-1102P-201ENST00000516149 96 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 RANP3-201ENST00000530970 276 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC090502.2-201ENST00000549267 280 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 OR4K8P-201ENST00000578842 1048 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC103710.2-201ENST00000609912 942 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 AC009487.4-201ENST00000624969 3585 ntBASIC1.92□□□□□ -2.1
HLA-DQB2P05538 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 NPM1P10-201ENST00000398310 865 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AL133264.1-201ENST00000407157 562 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RPS3AP24-201ENST00000407896 734 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RNU4-72P-201ENST00000410754 173 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC099548.1-201ENST00000421443 426 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC098614.2-201ENST00000426040 255 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 GTF2IP20-201ENST00000431663 360 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AL512661.1-201ENST00000434586 1253 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 PGBD4P3-201ENST00000440731 581 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 FGF7P5-201ENST00000441829 291 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RPS15AP27-201ENST00000449183 343 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 UBL5P3-201ENST00000475112 231 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC022483.1-201ENST00000514020 567 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 SNORA48.10-201ENST00000516965 160 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC025755.1-201ENST00000521306 278 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 TRAV28-201ENST00000557548 323 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 MIR3117-201ENST00000584034 78 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC073308.1-201ENST00000623696 305 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 AP003399.1-201ENST00000637534 361 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.91□□□□□ -2.1
HLA-DQB2P05538 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB2P05538 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms