Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA1P02708 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA1P02708 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.9□□□□□ -1.95
CHRNA1P02708 AC080013.3-201ENST00000606839 578 ntBASIC2.9□□□□□ -1.95
CHRNA1P02708 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.9□□□□□ -1.95
CHRNA1P02708 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA1P02708 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA1P02708 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHRNA1P02708 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA1P02708 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
CHRNA1P02708 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.95
CHRNA1P02708 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHRNA1P02708 DDX43P2-201ENST00000604753 1354 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
CHRNA1P02708 RPL9P7-201ENST00000330965 580 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 RNU6-359P-201ENST00000365466 108 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 RNU6-76P-201ENST00000384060 104 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 RSL24D1P4-201ENST00000400938 484 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHRNA1P02708 MIR1261-201ENST00000408659 82 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 USP9YP33-201ENST00000412220 421 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.89□□□□□ -1.95
CHRNA1P02708 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.89□□□□□ -1.95
CHRNA1P02708 AC092573.2-201ENST00000434546 243 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.89□□□□□ -1.95
CHRNA1P02708 USP9YP35-201ENST00000435696 412 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.89□□□□□ -1.95
CHRNA1P02708 CR769776.1-201ENST00000441254 787 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.89□□□□□ -1.95
CHRNA1P02708 MTND2P24-201ENST00000453434 806 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.89□□□□□ -1.95
CHRNA1P02708 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.89□□□□□ -1.95
CHRNA1P02708 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.89□□□□□ -1.95
CHRNA1P02708 AC087359.1-201ENST00000508335 1740 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 RAC1P5-201ENST00000512182 576 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC024589.1-201ENST00000512207 263 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.89□□□□□ -1.95
CHRNA1P02708 RNA5SP76-201ENST00000516277 87 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.89□□□□□ -1.95
CHRNA1P02708 MTND4P33-201ENST00000556706 766 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC012321.1-201ENST00000561622 1588 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.89□□□□□ -1.95
CHRNA1P02708 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AL353997.4-201ENST00000586196 166 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC083760.1-201ENST00000589621 670 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC004067.1-201ENST00000608733 700 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC097478.2-201ENST00000610572 514 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 Z99129.2-201ENST00000619967 314 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 AC027309.3-201ENST00000623419 351 ntBASIC2.89□□□□□ -1.95
CHRNA1P02708 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHRNA1P02708 AP000526.1-201ENST00000603308 1388 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHRNA1P02708 SDAD1P2-201ENST00000441308 2028 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CHRNA1P02708 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CHRNA1P02708 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHRNA1P02708 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHRNA1P02708 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHRNA1P02708 RNU6-1078P-201ENST00000364522 103 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 ANAPC10P1-201ENST00000395991 556 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 RPLP0P7-201ENST00000416050 667 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 AC234781.2-201ENST00000426370 994 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.88□□□□□ -1.95
CHRNA1P02708 RPS25P9-201ENST00000435591 252 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.88□□□□□ -1.95
CHRNA1P02708 MTND3P1-201ENST00000441336 220 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 MTND5P14-201ENST00000441481 1267 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 RPL30P5-201ENST00000494923 336 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AC020699.1-201ENST00000505161 445 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 AC026241.1-201ENST00000517873 2142 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 HMGN1P28-201ENST00000521340 364 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AP003122.3-201ENST00000526316 255 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 MIR3609-201ENST00000582661 80 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.88□□□□□ -1.95
CHRNA1P02708 AL158042.1-201ENST00000605338 460 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 AC007349.4-201ENST00000608114 532 ntBASIC2.88□□□□□ -1.95
CHRNA1P02708 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CHRNA1P02708 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHRNA1P02708 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CHRNA1P02708 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHRNA1P02708 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CHRNA1P02708 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHRNA1P02708 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.87□□□□□ -1.95
CHRNA1P02708 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHRNA1P02708 VTRNA1-1-201ENST00000363120 99 ntBASIC2.87□□□□□ -1.95
CHRNA1P02708 RNU6-1207P-201ENST00000384343 107 ntBASIC2.87□□□□□ -1.95
CHRNA1P02708 MIR513B-201ENST00000385136 84 ntBASIC2.87□□□□□ -1.95
CHRNA1P02708 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
CHRNA1P02708 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHRNA1P02708 AL356421.1-201ENST00000403255 413 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms