Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.56□□□□□ -2
NPHP4O75161 DEFB130D-201ENST00000426866 237 ntBASIC2.56□□□□□ -2
NPHP4O75161 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.56□□□□□ -2
NPHP4O75161 OR51B8P-201ENST00000449892 769 ntBASIC2.56□□□□□ -2
NPHP4O75161 AC084024.2-201ENST00000503480 791 ntBASIC2.56□□□□□ -2
NPHP4O75161 AC112518.2-201ENST00000508565 425 ntBASIC2.56□□□□□ -2
NPHP4O75161 AC048346.1-201ENST00000510247 144 ntBASIC2.56□□□□□ -2
NPHP4O75161 RNU6-885P-201ENST00000516607 104 ntBASIC2.56□□□□□ -2
NPHP4O75161 RNU6-711P-201ENST00000517255 106 ntBASIC2.56□□□□□ -2
NPHP4O75161 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.56□□□□□ -2
NPHP4O75161 SNRPGP16-201ENST00000533275 226 ntBASIC2.56□□□□□ -2
NPHP4O75161 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.56□□□□□ -2
NPHP4O75161 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.56□□□□□ -2
NPHP4O75161 AC008962.1-201ENST00000605729 304 ntBASIC2.56□□□□□ -2
NPHP4O75161 AL118556.2-201ENST00000614375 824 ntBASIC2.56□□□□□ -2
NPHP4O75161 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.56□□□□□ -2
NPHP4O75161 AC068831.7-201ENST00000616954 363 ntBASIC2.56□□□□□ -2
NPHP4O75161 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NPHP4O75161 ZNF849P-201ENST00000594711 1566 ntBASIC2.56□□□□□ -2
NPHP4O75161 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
NPHP4O75161 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
NPHP4O75161 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NPHP4O75161 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.55□□□□□ -2
NPHP4O75161 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NPHP4O75161 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NPHP4O75161 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.55□□□□□ -2
NPHP4O75161 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.55□□□□□ -2
NPHP4O75161 FCF1P2-201ENST00000415284 583 ntBASIC2.55□□□□□ -2
NPHP4O75161 WARS2P1-201ENST00000429678 537 ntBASIC2.55□□□□□ -2
NPHP4O75161 AC005345.1-201ENST00000431868 217 ntBASIC2.55□□□□□ -2
NPHP4O75161 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.55□□□□□ -2
NPHP4O75161 AC004022.1-201ENST00000447766 1066 ntBASIC2.55□□□□□ -2
NPHP4O75161 RPS20P24-201ENST00000457473 361 ntBASIC2.55□□□□□ -2
NPHP4O75161 AL121594.1-201ENST00000475906 575 ntBASIC2.55□□□□□ -2
NPHP4O75161 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
NPHP4O75161 AC121161.1-201ENST00000510606 652 ntBASIC2.55□□□□□ -2
NPHP4O75161 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.55□□□□□ -2
NPHP4O75161 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.55□□□□□ -2
NPHP4O75161 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
NPHP4O75161 AC009318.4-201ENST00000620496 486 ntBASIC2.55□□□□□ -2
NPHP4O75161 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.55□□□□□ -2
NPHP4O75161 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
NPHP4O75161 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPHP4O75161 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
NPHP4O75161 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPHP4O75161 Y_RNA.191-201ENST00000363972 113 ntBASIC2.54□□□□□ -2
NPHP4O75161 RNU6-1074P-201ENST00000383995 104 ntBASIC2.54□□□□□ -2
NPHP4O75161 U6.112-201ENST00000384129 70 ntBASIC2.54□□□□□ -2
NPHP4O75161 SNORD116-23-201ENST00000384645 92 ntBASIC2.54□□□□□ -2
NPHP4O75161 AL136133.1-201ENST00000413694 376 ntBASIC2.54□□□□□ -2
NPHP4O75161 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.54□□□□□ -2
NPHP4O75161 MTCO2P1-201ENST00000424648 477 ntBASIC2.54□□□□□ -2
NPHP4O75161 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.54□□□□□ -2
NPHP4O75161 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.54□□□□□ -2
NPHP4O75161 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPHP4O75161 AC109486.1-201ENST00000486833 374 ntBASIC2.54□□□□□ -2
NPHP4O75161 AC093767.1-201ENST00000504523 156 ntBASIC2.54□□□□□ -2
NPHP4O75161 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.54□□□□□ -2
NPHP4O75161 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.54□□□□□ -2
NPHP4O75161 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.54□□□□□ -2
NPHP4O75161 AC092436.3-201ENST00000511788 257 ntBASIC2.54□□□□□ -2
NPHP4O75161 SNORD59.2-201ENST00000516873 68 ntBASIC2.54□□□□□ -2
NPHP4O75161 AP001029.3-201ENST00000588063 596 ntBASIC2.54□□□□□ -2
NPHP4O75161 AC005776.1-201ENST00000603164 290 ntBASIC2.54□□□□□ -2
NPHP4O75161 AL355812.1-201ENST00000603215 216 ntBASIC2.54□□□□□ -2
NPHP4O75161 AC009314.1-201ENST00000603871 304 ntBASIC2.54□□□□□ -2
NPHP4O75161 AL355810.1-201ENST00000614629 552 ntBASIC2.54□□□□□ -2
NPHP4O75161 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.54□□□□□ -2
NPHP4O75161 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
NPHP4O75161 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.54□□□□□ -2
NPHP4O75161 RNU6-115P-201ENST00000364310 107 ntBASIC2.53□□□□□ -2
NPHP4O75161 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
NPHP4O75161 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.53□□□□□ -2
NPHP4O75161 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.53□□□□□ -2
NPHP4O75161 AL035405.1-201ENST00000400795 710 ntBASIC2.53□□□□□ -2
NPHP4O75161 RNU6-575P-201ENST00000411326 105 ntBASIC2.53□□□□□ -2
NPHP4O75161 SFR1P2-201ENST00000421841 730 ntBASIC2.53□□□□□ -2
NPHP4O75161 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.53□□□□□ -2
NPHP4O75161 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.53□□□□□ -2
NPHP4O75161 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.53□□□□□ -2
NPHP4O75161 AL645638.1-201ENST00000440519 361 ntBASIC2.53□□□□□ -2
NPHP4O75161 AL034418.1-201ENST00000448675 860 ntBASIC2.53□□□□□ -2
NPHP4O75161 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.53□□□□□ -2
NPHP4O75161 VPS26AP1-201ENST00000483197 979 ntBASIC2.53□□□□□ -2
NPHP4O75161 CBX3P3-201ENST00000508108 532 ntBASIC2.53□□□□□ -2
NPHP4O75161 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
NPHP4O75161 RNU6-27P-201ENST00000516146 107 ntBASIC2.53□□□□□ -2
NPHP4O75161 AC022690.1-201ENST00000526681 550 ntBASIC2.53□□□□□ -2
NPHP4O75161 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.53□□□□□ -2
NPHP4O75161 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.53□□□□□ -2
NPHP4O75161 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.53□□□□□ -2
NPHP4O75161 AC103987.3-201ENST00000582071 292 ntBASIC2.53□□□□□ -2
NPHP4O75161 AC106900.2-201ENST00000604994 317 ntBASIC2.53□□□□□ -2
NPHP4O75161 MIR502-201ENST00000606349 86 ntBASIC2.53□□□□□ -2
NPHP4O75161 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.53□□□□□ -2
NPHP4O75161 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.53□□□□□ -2
NPHP4O75161 AP000553.5-201ENST00000641933 54 ntBASIC2.53□□□□□ -2
NPHP4O75161 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.53□□□□□ -2
NPHP4O75161 MTND5P35-201ENST00000557537 1720 ntBASIC2.53□□□□□ -2.01
NPHP4O75161 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms