Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NEDD8-MDP1E9PL57 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 Y_RNA.560-201ENST00000384689 102 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 SNORA46-201ENST00000384762 135 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 U3.20-201ENST00000390909 217 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AL031121.1-201ENST00000406553 254 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-920P-201ENST00000410926 92 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 CCDC58P2-201ENST00000417131 366 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 YPEL5P1-201ENST00000419731 367 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 MTND2P18-201ENST00000419962 1030 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 UBE2D3P2-201ENST00000424409 445 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC024082.2-201ENST00000434771 238 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 RPL7P36-201ENST00000444633 681 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 GDI2P2-201ENST00000445131 608 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 MTND1P9-201ENST00000453775 944 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC109464.2-201ENST00000510242 943 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC105914.1-201ENST00000511798 226 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 RN7SKP282-201ENST00000516824 299 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC007834.2-201ENST00000536310 343 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC125611.2-201ENST00000551907 647 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC012435.1-202ENST00000568772 240 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 RPL12P50-201ENST00000603116 116 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC007619.2-201ENST00000605743 379 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AC095031.1-201ENST00000623685 672 ntBASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.94□□□□□ -1.94
NEDD8-MDP1E9PL57 AL513185.3-201ENST00000433335 1300 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU5E-8P-201ENST00000363502 116 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-1078P-201ENST00000364522 103 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 SNORD116-8-201ENST00000384365 95 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 PPP1R11P2-201ENST00000423543 382 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 USP9YP36-201ENST00000424581 829 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AL365184.2-201ENST00000431139 435 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC109583.1-201ENST00000432156 268 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 UBE2V1P13-201ENST00000436983 439 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 RPL21P104-201ENST00000464143 478 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 OSBPL9P5-201ENST00000542581 171 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 SETP2-201ENST00000553886 926 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC091489.2-201ENST00000566263 604 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC109446.2-201ENST00000567872 497 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 MIR3915-201ENST00000578518 97 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 MIR4513-201ENST00000581077 86 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC060771.1-201ENST00000582031 164 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 MIR4672-201ENST00000583126 81 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC078899.3-201ENST00000599065 212 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 VIS1.1-201ENST00000610517 203 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 AC079597.1-201ENST00000624306 508 ntBASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NEDD8-MDP1E9PL57 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AC011460.1-201ENST00000636268 1834 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-50P-201ENST00000362356 103 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-173P-201ENST00000364215 104 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-76P-201ENST00000384060 104 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 RNU6-754P-201ENST00000391166 107 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 AL359704.1-201ENST00000411586 781 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 TPMTP3-201ENST00000411928 735 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 MTND1P21-201ENST00000412991 285 ntBASIC2.92□□□□□ -1.94
NEDD8-MDP1E9PL57 Z99497.1-201ENST00000421282 135 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms