Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 AC104229.1-201ENST00000561364 255 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 AC105245.1-201ENST00000581934 244 ntBASIC1.27□□□□□ -2.21
CNOT1A5YKK6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CNOT1A5YKK6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 MIR153-1-201ENST00000384914 90 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC114973.1-201ENST00000429057 632 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RPL17P49-201ENST00000443728 411 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL353718.1-201ENST00000451028 517 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RNU6-1132P-201ENST00000459214 107 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 MTCO3P35-201ENST00000485582 781 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RNU1-61P-201ENST00000516107 151 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RNU6-405P-201ENST00000516637 110 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RNU6-467P-201ENST00000517027 110 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 MTND2P17-201ENST00000550281 688 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL049838.1-201ENST00000563647 981 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL138976.2-201ENST00000563989 694 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC006338.1-201ENST00000618453 749 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 Y_RNA.167-201ENST00000363735 109 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 SNORA18.2-201ENST00000383865 132 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 MIR320A-201ENST00000385302 82 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RPS26P56-201ENST00000444468 240 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL109741.2-201ENST00000455561 343 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC092989.1-201ENST00000481235 277 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC008427.1-201ENST00000503102 655 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RNU1-92P-201ENST00000517017 135 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 SETP2-201ENST00000553886 926 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AC005034.5-201ENST00000604219 466 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 AL355816.1-201ENST00000607951 118 ntBASIC1.26□□□□□ -2.21
CNOT1A5YKK6 RPL26P37-201ENST00000411983 438 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AC244098.2-201ENST00000422068 99 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 SUMO1P4-201ENST00000429430 302 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 LSM1P1-201ENST00000438629 273 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AL121871.1-201ENST00000443413 436 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AC125611.2-201ENST00000551907 647 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 RNU6-461P-201ENST00000364195 107 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 RNU4-91P-201ENST00000364778 135 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 snoU13.3-201ENST00000459441 104 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AC005912.1-201ENST00000495392 255 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 CDC42P4-201ENST00000510507 563 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.25□□□□□ -2.21
CNOT1A5YKK6 AC245884.12-201ENST00000615364 59 ntBASIC1.25□□□□□ -2.21
CNOT1A5YKK6 FO393413.1-201ENST00000402892 195 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AL033519.2-201ENST00000403958 392 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.24□□□□□ -2.21
CNOT1A5YKK6 RPL35AP22-201ENST00000436855 335 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.24□□□□□ -2.21
CNOT1A5YKK6 HMGN2P16-201ENST00000456802 261 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 MRPL42P6-201ENST00000486397 371 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.24□□□□□ -2.21
CNOT1A5YKK6 HMGB3P3-201ENST00000510526 400 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.24□□□□□ -2.21
CNOT1A5YKK6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC113368.1-201ENST00000603736 382 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AL356118.1-201ENST00000635272 1078 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 AC099654.7-201ENST00000635788 2127 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 MTND4P12-201ENST00000498999 1377 ntBASIC1.24□□□□□ -2.21
CNOT1A5YKK6 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC121758.2-201ENST00000553271 193 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 MIR924-201ENST00000638017 53 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC123912.3-201ENST00000600907 1367 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 RNF6P1-201ENST00000444889 1784 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 SGO1P2-201ENST00000429458 1589 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms