Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 MIR126-201ENST00000362291 85 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 SNORA40.18-201ENST00000391200 128 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 DSTNP4-201ENST00000399472 474 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 RNU4-26P-201ENST00000410270 107 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AC104629.2-201ENST00000468627 598 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 RPS29P21-201ENST00000496272 170 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AC111193.1-201ENST00000504097 155 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AC010186.2-204ENST00000537668 439 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 YWHAZP1-201ENST00000556286 722 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AP002826.1-201ENST00000608835 315 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 AC010678.1-201ENST00000614118 713 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 HPVC1-201ENST00000629899 1198 ntBASIC1.3□□□□□ -2.2
TRAV30A0A087WSZ9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 RNU4-31P-201ENST00000384211 141 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 RNU6-821P-201ENST00000390995 107 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 SSXP10-201ENST00000402595 565 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AL033519.2-201ENST00000403958 392 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AL160175.1-201ENST00000428124 247 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AC003989.2-201ENST00000440224 169 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 RPS29P11-201ENST00000496507 171 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 EEF1A1P37-201ENST00000522748 715 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AC084851.1-201ENST00000529105 249 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AL773524.1-201ENST00000614065 229 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 AL356118.1-201ENST00000635272 1078 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 MTND2P41-201ENST00000637599 773 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 ZNF876P-202ENST00000398732 1485 ntBASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV30A0A087WSZ9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 RNU6-1328P-201ENST00000410938 106 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AL158823.1-201ENST00000418441 478 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 RPL12P25-201ENST00000455592 494 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC005410.1-202ENST00000460347 485 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC021146.2-201ENST00000504736 556 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC068135.2-201ENST00000569293 1028 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 MIR4255-201ENST00000579351 72 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 NTAN1P1-201ENST00000603150 646 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 uc_338.5-201ENST00000611839 155 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC091304.6-201ENST00000619761 202 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AP003400.5-201ENST00000624827 617 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC111188.2-201ENST00000529697 1387 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 AC025263.3-201ENST00000622965 1396 ntBASIC1.28□□□□□ -2.2
TRAV30A0A087WSZ9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RNU6-270P-201ENST00000364131 105 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RNA5SP125-201ENST00000364843 120 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RPL17P50-201ENST00000396131 546 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 MIR934-201ENST00000401241 83 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AL136372.1-201ENST00000403060 228 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RN7SKP101-201ENST00000411376 320 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AL445183.3-201ENST00000414168 502 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RPS7P9-201ENST00000414704 586 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 YWHAZP8-201ENST00000436935 731 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RNU6-420P-201ENST00000458780 107 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RPL30P5-201ENST00000494923 336 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RPL23AP63-201ENST00000498752 471 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AC008834.1-201ENST00000511612 175 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 RNU6-250P-201ENST00000516958 103 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 NRBF2P1-201ENST00000587407 859 ntBASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV30A0A087WSZ9 AL356473.1-201ENST00000406203 1408 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 AC008568.2-201ENST00000623862 2313 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 SNORA51.12-201ENST00000384448 134 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 POLHP1-201ENST00000411806 470 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 AC074117.2-201ENST00000417130 397 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 AC007098.1-201ENST00000420122 367 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 AC244636.1-201ENST00000421152 228 ntBASIC1.26□□□□□ -2.21
TRAV30A0A087WSZ9 MTCO3P46-201ENST00000425787 232 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms