Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL133243.3-201ENST00000617415 3004 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC005332.5-201ENST00000591222 2919 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 Y_RNA.176-201ENST00000363815 109 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 Y_RNA.188-201ENST00000363952 111 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RNA5SP175-201ENST00000364275 119 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RNU6-432P-201ENST00000384196 109 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 Y_RNA.463-201ENST00000384271 102 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RNU6-505P-201ENST00000384427 107 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 SNORD3H-201ENST00000384486 214 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 Y_RNA.557-201ENST00000384680 107 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RNU6-516P-201ENST00000411381 104 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 HMGB3P2-201ENST00000411913 584 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC108032.1-201ENST00000416706 207 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RPL7P28-201ENST00000437739 740 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RPS29P7-201ENST00000439662 171 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RPL23AP33-201ENST00000442301 452 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 CECR9-201ENST00000453421 199 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 snoU109.4-201ENST00000458953 143 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 SCARNA18-201ENST00000459004 134 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC135721.1-201ENST00000497954 479 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC108078.2-201ENST00000510750 236 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 HMGN1P28-201ENST00000521340 364 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AP002404.1-201ENST00000532005 451 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL670379.6-201ENST00000603753 252 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC025588.3-201ENST00000604182 274 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC008162.1-201ENST00000604718 254 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL670379.1-201ENST00000604752 252 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL670379.5-201ENST00000605253 252 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL670379.8-201ENST00000605353 252 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AL670379.7-201ENST00000605823 252 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 AC091925.2-201ENST00000625059 256 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCFC2Q9Y5Z7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 GABPAP-201ENST00000419271 1356 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RNU6-562P-201ENST00000362731 107 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RNU6-188P-201ENST00000364207 107 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 PTMAP2-201ENST00000397627 327 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 MIR450B-201ENST00000401182 78 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AL592291.1-201ENST00000403830 352 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RNU4-6P-201ENST00000410804 122 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RNU6-603P-201ENST00000411403 107 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RPL30P2-201ENST00000414021 291 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RPL23AP69-201ENST00000431134 458 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RPL23AP83-201ENST00000434984 473 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 Z98949.2-201ENST00000440996 144 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC239809.1-201ENST00000450470 217 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 U8.20-201ENST00000459445 131 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RPS20P21-201ENST00000466859 343 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RPL35AP15-201ENST00000468042 339 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC128713.1-201ENST00000471495 306 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RN7SL432P-201ENST00000484057 298 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RN7SL283P-201ENST00000489055 303 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC116337.1-201ENST00000509680 687 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RANP9-201ENST00000519957 271 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 RANP3-201ENST00000530970 276 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 MIR3941-201ENST00000582572 103 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC091178.1-203ENST00000584586 279 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC110743.1-201ENST00000584870 478 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC008521.1-201ENST00000587471 187 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AL355812.1-201ENST00000603215 216 ntBASIC4.54□□□□□ -1.68
HCFC2Q9Y5Z7 AC005014.2-201ENST00000607795 599 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms