Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AL138713.1-201ENST00000624026 2130 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AL161781.1-201ENST00000354277 403 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 U3.26-201ENST00000391236 204 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 CCNG1P1-201ENST00000406783 885 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 USP9YP19-201ENST00000412165 485 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 USP9YP13-201ENST00000417797 480 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 MTATP6P11-201ENST00000428071 670 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AL139109.1-201ENST00000455491 297 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC108734.3-201ENST00000481241 1165 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC135721.1-201ENST00000497954 479 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC105252.1-201ENST00000503089 286 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC022447.3-201ENST00000506865 495 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AL353997.4-201ENST00000586196 166 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC002545.1-201ENST00000592511 181 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC021749.1-201ENST00000604322 607 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AC120053.1-201ENST00000607706 736 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 AP000943.4-201ENST00000622912 357 ntBASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RHBDD3Q9Y3P4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-223P-201ENST00000362830 107 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-97P-201ENST00000363387 104 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 SNORA23-201ENST00000365128 182 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNU1-100P-201ENST00000365255 165 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-754P-201ENST00000391166 107 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AL603865.2-201ENST00000401679 213 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-920P-201ENST00000410926 92 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 Z75741.2-201ENST00000417272 1167 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 MICF-203ENST00000432679 129 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC073901.1-201ENST00000462471 408 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC069528.1-202ENST00000482888 637 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-1028P-201ENST00000517164 93 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC100870.1-201ENST00000522035 505 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 DUXAP3-201ENST00000603616 594 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC024257.5-201ENST00000612739 531 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 MIR7157-201ENST00000635801 60 ntBASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RHBDD3Q9Y3P4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC080128.1-201ENST00000474389 1917 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL356057.3-201ENST00000402607 340 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 RN7SKP140-201ENST00000411196 284 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL451054.2-201ENST00000420896 202 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC091390.3-201ENST00000426478 338 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC105272.1-201ENST00000438604 198 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC002381.1-201ENST00000447049 280 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 RPL18AP17-201ENST00000455326 198 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 RNU7-136P-201ENST00000458819 69 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 SRIP1-201ENST00000489235 288 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 RNA5SP282-201ENST00000516355 108 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 NACAP3-201ENST00000552100 481 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL359212.1-201ENST00000556608 614 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC135628.1-201ENST00000568867 534 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AL356575.1-201ENST00000603008 283 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 AC013562.2-201ENST00000611632 603 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms