Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC023424.2-201ENST00000493479 777 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 MTCYBP17-201ENST00000503579 789 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC091435.1-201ENST00000505442 584 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC117522.3-201ENST00000507974 584 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC098799.2-201ENST00000509466 868 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC087276.1-201ENST00000529659 480 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AL356057.1-201ENST00000533798 831 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC110760.3-201ENST00000598794 467 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC004853.1-201ENST00000604902 698 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AL079343.1-201ENST00000572358 1771 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 NACA3P-201ENST00000359690 648 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 RNA5SP139-201ENST00000364340 117 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 RNU6-621P-201ENST00000364752 109 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 SNORD116-1-201ENST00000384335 95 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 SNORD116-8-201ENST00000384365 95 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 MIR135A2-201ENST00000384854 100 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 ERHP2-201ENST00000402323 299 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 SNORA11.2-201ENST00000408318 127 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 RNA5SP21-201ENST00000410917 96 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 RPL22P18-201ENST00000417197 377 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 RPS3AP37-201ENST00000419176 745 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 MTND1P34-201ENST00000438556 671 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AL513043.1-201ENST00000439124 535 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 CR769776.1-201ENST00000441254 787 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AL121871.1-201ENST00000443413 436 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC092155.2-201ENST00000454675 477 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC010486.3-201ENST00000511602 785 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 Y_RNA.688-201ENST00000516565 95 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC021171.1-201ENST00000603137 706 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 DUXAP11-201ENST00000603858 526 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 AC005539.1-201ENST00000443768 1479 ntBASIC3.21□□□□□ -1.9
CLIP2Q9UDT6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 FTLP6-201ENST00000355274 422 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MIR196B-201ENST00000384852 84 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MIR9-1-201ENST00000385198 89 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AL078595.1-201ENST00000404458 226 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MIR1302-8-201ENST00000408342 128 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 TPMTP2-201ENST00000414372 726 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AL356320.2-201ENST00000417263 507 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 TIMM9P2-201ENST00000419324 266 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC004263.1-201ENST00000479327 332 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC103975.1-201ENST00000482506 483 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 RN7SL432P-201ENST00000484057 298 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC091951.3-201ENST00000504093 246 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MTND1P22-201ENST00000510572 951 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AP003033.1-201ENST00000527244 415 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC125611.2-201ENST00000551907 647 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC090695.1-201ENST00000561269 1222 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC009094.1-201ENST00000564443 426 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MIR4513-201ENST00000581077 86 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 NRBF2P5-201ENST00000603087 788 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 MTND3P19-201ENST00000603825 345 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AL357080.1-201ENST00000617394 239 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AC009812.4-201ENST00000569134 1805 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 AL136360.1-201ENST00000503377 1900 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 DDX43P2-201ENST00000604753 1354 ntBASIC3.2□□□□□ -1.9
CLIP2Q9UDT6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms