Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 SNORD35B-201ENST00000363660 87 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RNU6-74P-201ENST00000384235 107 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RNU6-606P-201ENST00000384721 111 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC068050.1-201ENST00000394891 380 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 EI24P2-201ENST00000397776 1076 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RN7SKP159-201ENST00000410657 292 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RNU6-373P-201ENST00000411247 98 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL691449.1-201ENST00000426570 421 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC007389.2-201ENST00000434630 306 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RPS15AP9-201ENST00000439856 381 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 DDX3P2-201ENST00000446138 111 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 NANOGP10-201ENST00000453325 895 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC108059.3-201ENST00000456388 214 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RPS20P20-201ENST00000460498 340 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 RN7SL330P-201ENST00000469709 307 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC110792.1-201ENST00000491826 472 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 OR4R1P-201ENST00000529879 463 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 OR4P1P-201ENST00000530808 1136 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC015917.1-201ENST00000579654 510 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC104662.1-201ENST00000604448 511 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL161756.2-201ENST00000604597 246 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL451044.1-201ENST00000604867 238 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL158211.4-201ENST00000606988 584 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL590099.1-201ENST00000615276 138 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC024940.5-201ENST00000622889 474 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC091953.5-201ENST00000622919 233 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 AL359697.1-201ENST00000624879 587 ntBASIC4.05□□□□□ -1.76
DKK3Q9UBP4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DKK3Q9UBP4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 Z82217.1-201ENST00000625157 8149 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 OR1S2-201ENST00000302592 978 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 SNORA63.1-201ENST00000362493 131 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 Y_RNA.157-201ENST00000363638 102 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 RNU6-339P-201ENST00000384310 107 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 RNU4-6P-201ENST00000410804 122 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 CYCSP19-201ENST00000411715 316 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 OR9R1P-201ENST00000412200 877 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 HMGN1P24-201ENST00000412282 298 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 FTH1P1-201ENST00000437933 532 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 RAC1P7-201ENST00000445367 377 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC140076.1-201ENST00000449897 361 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 UBDP1-202ENST00000457888 382 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 PCBP2P3-201ENST00000509726 843 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC011979.2-201ENST00000527568 352 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 OR5BN1P-201ENST00000532955 829 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 SETP7-201ENST00000552169 453 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC022968.1-201ENST00000567372 442 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 COX6CP3-201ENST00000580869 223 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 Z84480.1-201ENST00000605131 311 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.04□□□□□ -1.76
DKK3Q9UBP4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.04□□□□□ -1.76
DKK3Q9UBP4 AC092326.2-201ENST00000624772 1561 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms