Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AL163153.1-201ENST00000554223 283 ntBASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC025627.2-201ENST00000576220 160 ntBASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC006504.3-201ENST00000586818 523 ntBASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC114781.5-201ENST00000615297 108 ntBASIC4.24□□□□□ -1.73
DDX56Q9NY93 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 XIST_intron.1-201ENST00000619444 68 ntBASIC4.24□□□□□ -1.73
DDX56Q9NY93 MIR3653-201ENST00000625572 110 ntBASIC4.24□□□□□ -1.73
DDX56Q9NY93 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX56Q9NY93 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX56Q9NY93 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 MIR383-201ENST00000362257 73 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 RNU6-1322P-201ENST00000364309 107 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 U3.22-201ENST00000391120 215 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AL139397.2-201ENST00000404529 772 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 UBE2V1P10-201ENST00000414685 269 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC069157.1-201ENST00000421749 137 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 DNAJC19P7-201ENST00000428811 344 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 SNRPEP9-201ENST00000436794 238 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 MTND1P18-201ENST00000448191 573 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 RN7SL604P-201ENST00000492589 296 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AL512310.1-201ENST00000548639 172 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 MIR4775-201ENST00000581168 75 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC107304.1-201ENST00000604229 296 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AF250324.2-201ENST00000608299 610 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 MIR7151-201ENST00000617477 60 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AL157786.1-207ENST00000627771 695 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 AL512643.1-201ENST00000635735 524 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX56Q9NY93 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 MAPK10-373ENST00000641983 6772 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX56Q9NY93 AC103710.2-202ENST00000641454 2853 ntBASIC4.23□□□□□ -1.73
DDX56Q9NY93 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX56Q9NY93 MAPK10-253ENST00000641010 4072 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 RNU6-1287P-201ENST00000362914 107 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 RNU6-1060P-201ENST00000384664 107 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX56Q9NY93 RNU2-68P-201ENST00000410878 191 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 FCF1P9-201ENST00000412546 282 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 MRPL50P2-201ENST00000416821 482 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 RPL21P109-201ENST00000422213 475 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AL592045.1-201ENST00000429867 352 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 C8orf59P1-201ENST00000429930 303 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC087650.1-201ENST00000431445 468 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AL591704.1-201ENST00000432574 275 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 RPL36AP53-201ENST00000432891 316 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 ATP5HP2-201ENST00000433885 485 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 HMGB3P22-202ENST00000451823 572 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 FABP5P15-201ENST00000453566 214 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 UQCRHP4-201ENST00000471686 272 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 HMGN2P13-201ENST00000476476 274 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 RPS23P1-201ENST00000491662 432 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC091167.1-201ENST00000492017 396 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC104806.1-201ENST00000508720 308 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 PCBP2P3-201ENST00000509726 843 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 RNU6-123P-201ENST00000516163 102 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 RNU6-711P-201ENST00000517255 106 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX56Q9NY93 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX56Q9NY93 AC136619.2-201ENST00000563361 631 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 MIR4277-201ENST00000578298 84 ntBASIC4.22□□□□□ -1.73
DDX56Q9NY93 MIR4330-201ENST00000579077 105 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms