Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 SNORA38.1-201ENST00000364172 131 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 MIR670-201ENST00000390142 98 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 SNORA48.7-201ENST00000391302 135 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AL513475.1-201ENST00000406602 315 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 RPS3AP25-201ENST00000411660 793 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 USP9YP13-201ENST00000417797 480 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AL445687.1-201ENST00000439946 251 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 snoU13.22-201ENST00000459428 104 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 RPL7P18-201ENST00000478965 734 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 PSMA2P1-201ENST00000526365 646 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 UBE2L4-201ENST00000587688 464 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 YPEL5P2-201ENST00000605553 359 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AC034102.8-201ENST00000615146 484 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AC244100.1-202ENST00000621554 382 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AL158801.5-201ENST00000623123 465 ntBASIC2.77□□□□□ -1.97
POLE3Q9NRF9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
POLE3Q9NRF9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 RNU6-462P-201ENST00000362659 105 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 RNU6-1176P-201ENST00000390955 107 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 HMGB1P49-201ENST00000418882 569 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 PTENP1-201ENST00000447117 1215 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 RPL23AP11-201ENST00000475260 469 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 RPS29P2-201ENST00000479278 136 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 OR2A20P-203ENST00000498397 1268 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 MTND5P13-201ENST00000513046 1079 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 MTND5P4-201ENST00000514978 288 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC013562.2-201ENST00000611632 603 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC112204.3-201ENST00000623822 332 ntBASIC2.76□□□□□ -1.97
POLE3Q9NRF9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.76□□□□□ -1.97
POLE3Q9NRF9 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 SNORA71.1-201ENST00000364523 117 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 SNORA9.2-201ENST00000365361 133 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 SNORA54-201ENST00000384281 123 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AL512633.1-201ENST00000399931 655 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 CCNG1P1-201ENST00000406783 885 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 RPL21P24-201ENST00000413752 448 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC092648.1-201ENST00000425870 423 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 USP12PX-201ENST00000432383 1057 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 GSTA11P-201ENST00000452866 669 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AP000852.1-201ENST00000472460 573 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 RN7SL504P-201ENST00000494496 287 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 EIF4EP3-201ENST00000498782 656 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 MTCYBP43-201ENST00000513621 740 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 SNORA31.18-201ENST00000517043 134 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC022662.1-201ENST00000580252 331 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC010338.1-201ENST00000621823 717 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AP000676.3-201ENST00000623299 569 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC026422.1-201ENST00000623961 452 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AC068057.2-201ENST00000624047 895 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.75□□□□□ -1.97
POLE3Q9NRF9 AP000776.1-201ENST00000530032 1663 ntBASIC2.75□□□□□ -1.97
POLE3Q9NRF9 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.74□□□□□ -1.97
POLE3Q9NRF9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms