Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AL645937.1-201ENST00000641739 1652 ntBASIC3.22□□□□□ -1.89
SLC52A3Q9NQ40 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC52A3Q9NQ40 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC52A3Q9NQ40 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC52A3Q9NQ40 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC52A3Q9NQ40 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
SLC52A3Q9NQ40 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 OR5J1P-201ENST00000313544 939 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RNU6-97P-201ENST00000363387 104 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RNU6-1155P-201ENST00000363554 107 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RNU6-1283P-201ENST00000365314 105 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 U3.20-201ENST00000390909 217 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RNA5SP44-201ENST00000410446 133 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RAB9AP3-201ENST00000412737 573 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 MTND3P17-201ENST00000416968 344 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC017083.1-201ENST00000428093 483 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 ATP5JP1-201ENST00000431631 322 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL358934.1-201ENST00000432346 324 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 UBE2V1P8-201ENST00000437166 265 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RAB9AP1-201ENST00000449393 573 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL359385.1-201ENST00000456509 365 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL136097.1-201ENST00000456945 913 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RPS3AP17-201ENST00000472594 777 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RBM43P1-201ENST00000476891 1081 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 KCTD9P5-201ENST00000504141 1170 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC114967.1-201ENST00000504890 259 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 ZNF519P2-201ENST00000557032 169 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL356432.3-201ENST00000568952 465 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 MIR3682-201ENST00000581338 84 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 NRBF2P1-201ENST00000587407 859 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC006116.10-201ENST00000591836 581 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 DUXAP4-201ENST00000603046 613 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RBM11P1-201ENST00000604951 799 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 BX664608.1-201ENST00000610519 487 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL121772.2-201ENST00000614331 297 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL353748.2-201ENST00000622148 471 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC091953.2-201ENST00000623979 160 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC068880.5-201ENST00000624331 290 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 SEPT14P19-203ENST00000633205 211 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AL672296.1-201ENST00000427780 2158 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AC009902.3-201ENST00000606235 2172 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 AF127577.6-201ENST00000623352 2191 ntBASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC52A3Q9NQ40 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 RNU6-50P-201ENST00000362356 103 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 RNA5SP197-201ENST00000363357 119 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 U3.11-201ENST00000364476 212 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 CCNG1P1-201ENST00000406783 885 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 MTND1P21-201ENST00000412991 285 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 BX295541.1-201ENST00000417774 250 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 ISCA1P1-201ENST00000426679 387 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 ISCA1P6-201ENST00000427740 390 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 MTCO2P3-201ENST00000442543 421 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AL121871.1-201ENST00000443413 436 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 FGF7P6-202ENST00000451282 293 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 RBMY2UP-201ENST00000453474 324 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 SNORD121B-201ENST00000458838 81 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 RPL23AP62-201ENST00000463396 453 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AC055855.1-201ENST00000489563 579 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 RNU1-95P-201ENST00000516357 160 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 RNU1-128P-201ENST00000516704 160 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 AC107934.1-201ENST00000522215 217 ntBASIC3.2□□□□□ -1.9
SLC52A3Q9NQ40 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms