Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL157700.1-201ENST00000561973 1432 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 BDH2P1-201ENST00000602288 736 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL354950.2-201ENST00000617939 290 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC079684.1-201ENST00000621405 437 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 U6.114-201ENST00000636407 96 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 MIR3662-201ENST00000637030 95 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC004972.1-201ENST00000623934 2209 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AP001350.1-201ENST00000601906 1524 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC103710.2-202ENST00000641454 2853 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 XIAPP3-201ENST00000312918 795 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 SNORA63.1-201ENST00000362493 131 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 Y_RNA.38-201ENST00000362617 102 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 SNORD46.1-201ENST00000364139 104 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 RHOT1P2-201ENST00000366423 333 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 RNU6-629P-201ENST00000384061 103 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 MIR23A-201ENST00000385245 73 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 RPL21P17-201ENST00000397467 475 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 RNA5SP39-201ENST00000411245 120 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 AL591419.1-201ENST00000427423 339 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 GTF2IP20-201ENST00000431663 360 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC024082.2-201ENST00000434771 238 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 USP9YP7-201ENST00000436723 430 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 CYCSP43-201ENST00000438233 310 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AL451050.1-201ENST00000450126 415 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 USP9YP32-201ENST00000452432 430 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AL133162.1-201ENST00000463228 453 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 NIPA2P2-201ENST00000496376 1083 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 MTCYBP18-201ENST00000501056 747 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 RPL38P4-201ENST00000502376 214 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 SCARNA14-201ENST00000516903 136 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 FAM60BP-201ENST00000578364 658 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 MIR4775-201ENST00000581168 75 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AL049634.3-201ENST00000604968 457 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 AL121992.2-201ENST00000606262 256 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 SDR42E1P2-201ENST00000614861 481 ntBASIC4.41□□□□□ -1.7
VTA1Q9NP79 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.41□□□□□ -1.7
VTA1Q9NP79 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VTA1Q9NP79 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
VTA1Q9NP79 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VTA1Q9NP79 AL139276.1-201ENST00000311910 1001 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 Y_RNA.390-201ENST00000383932 102 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AL109913.1-201ENST00000421173 514 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 MTND5P20-201ENST00000448677 143 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 RN7SL585P-201ENST00000470538 280 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC010285.1-201ENST00000470580 392 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC078918.1-201ENST00000498515 228 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 UBE2CP3-201ENST00000502715 450 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 SNORA20.3-201ENST00000516880 132 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 SNORA31.22-201ENST00000517204 135 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 RNU6-840P-201ENST00000517275 65 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTA1Q9NP79 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AP005205.1-201ENST00000563503 508 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 MIR3921-201ENST00000577308 85 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC025946.2-201ENST00000603398 234 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC069200.1-201ENST00000609511 323 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC024940.5-201ENST00000622889 474 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AL034408.1-202ENST00000636088 415 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC009093.8-201ENST00000641769 292 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms