Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 AL445493.3-201ENST00000619568 477 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 AC091925.1-201ENST00000623204 462 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 AC111188.2-201ENST00000529697 1387 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 RNU6-222P-201ENST00000362438 107 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 Y_RNA.170-201ENST00000363746 110 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 RNU6-43P-201ENST00000384302 107 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 RNU6-178P-201ENST00000384631 104 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 AC023790.1-201ENST00000482174 347 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CHD8Q9HCK8 MIR3935-201ENST00000583472 104 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 GLUD1P4-201ENST00000590914 418 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 MIR6715B-201ENST00000637172 77 ntBASIC1.18□□□□□ -2.22
CHD8Q9HCK8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 SNORD48-201ENST00000364953 64 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 Y_RNA.610-201ENST00000410681 103 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC019070.1-201ENST00000415008 1024 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 SNRPEP10-201ENST00000420249 274 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC114973.1-201ENST00000429057 632 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 WARS2P1-201ENST00000429678 537 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC091488.1-201ENST00000604239 660 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC121333.1-201ENST00000567488 2709 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 SNORA2A-201ENST00000383885 135 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 RNU6-146P-201ENST00000384602 108 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC078918.1-201ENST00000498515 228 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 PRELID2P1-201ENST00000552837 301 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC103710.2-202ENST00000641454 2853 ntBASIC1.17□□□□□ -2.22
CHD8Q9HCK8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.17□□□□□ -2.22
CHD8Q9HCK8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 MIR329-2-201ENST00000385029 84 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNU6-1320P-201ENST00000390838 107 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNU6-1269P-201ENST00000391139 107 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNA5SP266-201ENST00000410273 108 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNU6-599P-201ENST00000459383 107 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNU6-1193P-201ENST00000459461 107 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 MIR4716-201ENST00000579628 84 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNU6-368P-201ENST00000620928 107 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RNU6-538P-201ENST00000622329 107 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 ARF4P2-201ENST00000430209 526 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 MTND2P2-201ENST00000434633 945 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 USP9YP7-201ENST00000436723 430 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 USP9YP32-201ENST00000452432 430 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 AC006270.3-201ENST00000605967 1036 ntBASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.16□□□□□ -2.22
CHD8Q9HCK8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
CHD8Q9HCK8 RNU6-39P-201ENST00000384344 107 ntBASIC1.15□□□□□ -2.22
CHD8Q9HCK8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.15□□□□□ -2.22
CHD8Q9HCK8 AC008850.1-201ENST00000427546 362 ntBASIC1.15□□□□□ -2.22
CHD8Q9HCK8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.15□□□□□ -2.22
CHD8Q9HCK8 AL391261.3-201ENST00000557194 520 ntBASIC1.15□□□□□ -2.22
CHD8Q9HCK8 MTND4LP24-201ENST00000572277 291 ntBASIC1.15□□□□□ -2.22
CHD8Q9HCK8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.15□□□□□ -2.22
CHD8Q9HCK8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
CHD8Q9HCK8 MIRLET7G-201ENST00000362280 84 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 RNU2-25P-201ENST00000411041 191 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 Z85995.1-201ENST00000415547 335 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 AC135999.1-201ENST00000478962 479 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 AP001960.1-201ENST00000506494 658 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 AC103833.1-201ENST00000517442 172 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.15□□□□□ -2.23
CHD8Q9HCK8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.15□□□□□ -2.23
CHD8Q9HCK8 C2orf27A-204ENST00000623058 969 ntBASIC1.15□□□□□ -2.23
CHD8Q9HCK8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.15□□□□□ -2.23
CHD8Q9HCK8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CHD8Q9HCK8 RPL5P19-201ENST00000404228 893 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC073264.1-201ENST00000411508 416 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.14□□□□□ -2.23
CHD8Q9HCK8 HMGB3P10-201ENST00000434734 572 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC107015.1-201ENST00000466902 747 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 MTND4LP22-201ENST00000508209 276 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 NDUFB4P9-201ENST00000511646 388 ntBASIC1.14□□□□□ -2.23
CHD8Q9HCK8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms