Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AC002545.1-201ENST00000592511 181 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 BNIP3P26-201ENST00000600827 554 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 MIR3670-4-201ENST00000612260 65 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AP001002.2-201ENST00000625137 386 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 MIR7515-201ENST00000637837 67 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 SNORA9-201ENST00000384215 133 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL360182.1-201ENST00000397433 468 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC011816.1-201ENST00000441346 546 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 OR10R1P-201ENST00000441524 1141 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 MTND1P31-201ENST00000449206 961 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC104563.1-201ENST00000476147 376 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC022634.1-201ENST00000520765 532 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC118942.1-201ENST00000529674 1035 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC123904.3-201ENST00000547218 814 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC021749.1-201ENST00000604322 607 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL139344.1-201ENST00000605228 195 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AC008498.1-201ENST00000613012 531 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AL138955.1-201ENST00000622881 1040 ntBASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LRRC40Q9H9A6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
LRRC40Q9H9A6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 RNU6-754P-201ENST00000391166 107 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AL356057.3-201ENST00000402607 340 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 CACYBPP2-201ENST00000453625 678 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 SRIP1-201ENST00000489235 288 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 EIF4EP3-201ENST00000498782 656 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 CYCSP2-201ENST00000558168 301 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 MIR5092-201ENST00000583139 88 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 ELOCP29-201ENST00000588193 334 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AL161756.2-201ENST00000604597 246 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 FTX_3.1-201ENST00000610451 147 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 AC010133.1-201ENST00000615809 842 ntBASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.65□□□□□ -1.99
LRRC40Q9H9A6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RNU6-884P-201ENST00000363889 107 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 SNORA25.6-201ENST00000364121 118 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RPL23AP29-201ENST00000397284 453 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 TXNP7-201ENST00000406296 293 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 MTND1P21-201ENST00000412991 285 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RPLP0P7-201ENST00000416050 667 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AL451054.2-201ENST00000420896 202 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 Z80107.1-201ENST00000436830 412 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 UBE2V1P13-201ENST00000436983 439 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RPL12P25-201ENST00000455592 494 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RPS3AP14-201ENST00000483907 780 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RPL36AP51-201ENST00000487216 318 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC105252.1-201ENST00000503089 286 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 MTND5P4-201ENST00000514978 288 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RNA5SP282-201ENST00000516355 108 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 SNORA31.18-201ENST00000517043 134 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC010376.1-201ENST00000522101 334 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 TPMTP1-201ENST00000592307 737 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC136601.2-201ENST00000604356 474 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AL138478.1-201ENST00000612252 832 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 AC135507.2-201ENST00000612443 309 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 LINC02211-204ENST00000642024 1070 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
LRRC40Q9H9A6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms