Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL353748.2-201ENST00000622148 471 ntBASIC2.71□□□□□ -1.98
NXF3Q9H4D5 AC091925.2-201ENST00000625059 256 ntBASIC2.71□□□□□ -1.98
NXF3Q9H4D5 AC116618.1-201ENST00000634617 774 ntBASIC2.71□□□□□ -1.98
NXF3Q9H4D5 U6.101-201ENST00000637707 76 ntBASIC2.71□□□□□ -1.98
NXF3Q9H4D5 MIR1322-201ENST00000638013 71 ntBASIC2.71□□□□□ -1.98
NXF3Q9H4D5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NXF3Q9H4D5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NXF3Q9H4D5 AC005539.1-201ENST00000443768 1479 ntBASIC2.71□□□□□ -1.98
NXF3Q9H4D5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC004944.1-201ENST00000517807 3059 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 FAM133CP-201ENST00000332869 704 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 SNORD113-6-201ENST00000363345 75 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 RNU6-157P-201ENST00000383957 107 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 SNORA1.3-201ENST00000384676 136 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 SNRPEP2-201ENST00000397592 279 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 FAT1P1-201ENST00000406588 507 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AL008987.1-201ENST00000415528 237 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 RPL32P28-201ENST00000443577 397 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 UBBP3-201ENST00000445497 241 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 USP9YP34-201ENST00000453983 808 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 RPS15AP17-201ENST00000470598 390 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 RPL30P14-201ENST00000482744 348 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC021146.8-201ENST00000507455 733 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC009712.1-201ENST00000564938 316 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AL158211.1-201ENST00000566763 763 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 MIR3945-201ENST00000581853 98 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 NUTF2P8-201ENST00000604593 363 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AL592221.1-201ENST00000605266 382 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC004696.1-201ENST00000614345 607 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC079395.3-201ENST00000615161 484 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AL138880.2-201ENST00000616214 239 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC025034.2-201ENST00000623264 286 ntBASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NXF3Q9H4D5 AC138915.1-201ENST00000565427 1685 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL079343.1-201ENST00000572358 1771 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 SNORA36C-201ENST00000384289 132 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL136372.1-201ENST00000403060 228 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 RPS4XP7-201ENST00000406274 780 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 RNU2-15P-201ENST00000410692 191 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 MTND3P1-201ENST00000441336 220 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL590664.1-201ENST00000448065 339 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC026410.2-201ENST00000460281 156 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 RPL23AP45-201ENST00000476406 468 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 RPS27AP9-201ENST00000477681 438 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 RPL7P18-201ENST00000478965 734 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 MTND2P14-201ENST00000482139 351 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC114981.1-201ENST00000503897 678 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC009901.1-201ENST00000506703 541 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC010587.2-201ENST00000511727 448 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC112673.1-201ENST00000513168 575 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 OR5AK1P-201ENST00000524837 922 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 RPL23AP84-201ENST00000571193 464 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC012669.1-201ENST00000603209 283 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL133507.1-201ENST00000605269 557 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC243773.3-201ENST00000613270 256 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AP000484.1-201ENST00000620067 1252 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL356585.4-201ENST00000623078 1229 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AP000770.2-201ENST00000623694 100 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AC099654.7-201ENST00000635788 2127 ntBASIC2.69□□□□□ -1.98
NXF3Q9H4D5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NXF3Q9H4D5 AL513185.3-201ENST00000433335 1300 ntBASIC2.68□□□□□ -1.98
NXF3Q9H4D5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
NXF3Q9H4D5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NXF3Q9H4D5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
NXF3Q9H4D5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.68□□□□□ -1.98
NXF3Q9H4D5 RNU6-1155P-201ENST00000363554 107 ntBASIC2.68□□□□□ -1.98
NXF3Q9H4D5 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
NXF3Q9H4D5 RNA5SP139-201ENST00000364340 117 ntBASIC2.68□□□□□ -1.98
NXF3Q9H4D5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms