Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 RNA5SP519-201ENST00000516480 119 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 RNA5SP73-201ENST00000516744 108 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 RNU6-685P-201ENST00000517088 95 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 RAB11AP2-201ENST00000545905 639 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC025884.1-201ENST00000556034 378 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 PARP1P2-201ENST00000556806 195 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC022968.1-201ENST00000567372 442 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC005668.1-201ENST00000571142 476 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 MTND6P33-201ENST00000571794 183 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC005261.5-201ENST00000596280 355 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC009248.2-201ENST00000619826 254 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AL136221.1-201ENST00000621449 509 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AC103710.2-202ENST00000641454 2853 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC113Q9H0I3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MTND4P35-201ENST00000604257 1375 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MIR383-201ENST00000362257 73 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNU1-108P-201ENST00000362556 161 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNA5SP189-201ENST00000364920 115 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MIR514A1-201ENST00000385133 98 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 CISD1P1-201ENST00000393907 327 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNA5SP36-201ENST00000410197 133 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AL356867.1-201ENST00000429623 299 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AL591212.2-201ENST00000433923 257 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AL132765.1-201ENST00000434165 553 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 PRDX3P3-201ENST00000447765 522 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RPL23AP81-201ENST00000455252 467 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC004801.2-202ENST00000463559 283 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC104164.2-201ENST00000496953 495 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC098591.2-201ENST00000510152 315 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNU6-1314P-201ENST00000517139 104 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 PSMA3P-201ENST00000555485 635 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AL121576.1-201ENST00000556055 276 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MIR4424-201ENST00000585257 86 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 IPO5P1-202ENST00000600039 287 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC004825.2-201ENST00000616634 455 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MTND5P42-201ENST00000637720 498 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC113Q9H0I3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RNU6-600P-201ENST00000362524 99 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RNU6-14P-201ENST00000384630 106 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 MIR607-201ENST00000385241 96 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 SNORD66.1-201ENST00000391230 76 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RPL32P23-201ENST00000397237 405 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AL592114.1-201ENST00000403842 483 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AL121834.1-202ENST00000404494 277 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 MIR1290-201ENST00000408735 78 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RN7SKP32-201ENST00000410167 303 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 BTF3L4P3-201ENST00000418879 476 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 NUTF2P7-201ENST00000453086 375 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AL121877.1-201ENST00000453704 622 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 SCARNA18-201ENST00000459004 134 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AP000873.1-201ENST00000463987 400 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RPL7P19-201ENST00000469948 618 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC103987.1-201ENST00000473394 348 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC005921.1-201ENST00000510589 286 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 PPBPP1-201ENST00000510807 373 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC023141.12-201ENST00000512399 199 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RANP9-201ENST00000519957 271 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 MRPL49P2-201ENST00000521066 465 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC107953.1-201ENST00000522216 297 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms